Gene Information

Name : LMHCC_1500 (LMHCC_1500)
Accession : YP_002350458.1
Strain : Listeria monocytogenes HCC23
Genome accession: NC_011660
Putative virulence/resistance : Virulence
Product : propanediol utilization protein PduA
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 1513789 - 1514076 bp
Length : 288 bp
Strand : -
Note : -

DNA sequence : 
ATGCAAGAAGCACTAGGCTTAGTTGAAACTAAAGGGCTAGTCGGCGCCATTGAAGCCGCTGACGCCATGGTTAAATCAGC
TAACGTAACATTAACAGGGTACGAAAAAATCGGGTCTGGACTGGTTACTGTCATGGTTCGTGGCGATGTTGGTGCAGTGA
AAGCAGCGACAGAAGCAGGAGCAGCGGCAGCAAGAAATGTAGGTACCGTGATGAGTACACATGTTATTCCTCGTCCGCAT
ACTGATGTGGAAGAAATTTTACCAGTGAGGGTGAAGTCAGATGAGTGA

Protein sequence : 
MQEALGLVETKGLVGAIEAADAMVKSANVTLTGYEKIGSGLVTVMVRGDVGAVKAATEAGAAAARNVGTVMSTHVIPRPH
TDVEEILPVRVKSDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 5e-17 67
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 7e-16 64
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 7e-16 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LMHCC_1500 YP_002350458.1 propanediol utilization protein PduA VFG1596 Protein 2e-17 67
LMHCC_1500 YP_002350458.1 propanediol utilization protein PduA VFG1598 Protein 3e-16 64
LMHCC_1500 YP_002350458.1 propanediol utilization protein PduA VFG1597 Protein 3e-16 62