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Name : secD (Tmz1t_3409) Accession : YP_002890380.1 Strain : Thauera sp. MZ1T Genome accession: NC_011662 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 3728469 - 3730334 bp Length : 1866 bp Strand : + Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : ATGAACCGCTATCCCCTCTGGAAGAACCTCCTGATCGGCCTCGTGCTGCTCTGGGGCCTGATCTACACCCTGCCCAACTT CTACGGCGAGGTGCCGGCGGTGCAGGTGTCCAGCGCCAAGGCCACGCTCAAGCTCGACACCGCGGCCACCACCGACCGCA TCGCCGGTGCGCTCAAGGCGGCCGGCATCGAGAACACCGGCATCTTCTCCGACGCCACCAGCGTGCGTGCCCGCTTCAAG GACACCGAGACCCAGCTGCGCGCCAAGGACGTCATCGAGCAGACCTTCAACCCCGACGCCGCCGACCCGTCCTACGTGGT CGCGCTCAACCTGCTGTCGGCCTCGCCGAGCTGGCTCACCTCGATCCAGGCGCTGCCGATGTATCTCGGCCTCGACCTGC GCGGCGGGGTGCACTTCCTGCTCGAGGTCGACATGCCGGGTGCGCTGGTCAAGCGCCTCGATTCGACCACCGGCGACCTG CGCACCCTGATGCGCGACAAGAGCGTGCGCCACGCCGGCATCACCCGCGAAGGCAACACCGTGGTGATCCGCTTCCGCGA CGCCGCCCAGCGCGAGGCGGGCCGGCGCGCGATCTTCGACAGCACCACCGACCTGCAGCTCGTCGAGCGCGACGATGCCG CCGACGACCTCAAGCTGGTCGCCACGCTGACGCCGCAGGCGCAGCAGACCATGCGCGACTTCGCGATCAAGCAGAACATC ACCACGCTGCACAACCGCATCAACGAGCTCGGCGTCGCCGAGCCGGTGATCCAGCAGCAGGGTGCCGAGCGCATCGTGGT GCAGCTGCCCGGCGTGCAGGACGTGGCCAAGGCCAAGGACATCCTCGGCCGCACCGCCACGCTGGAAGTGCGCATGGTGG ACGACACCCCGGGCGCGATCGAGCAGGCGCTCGCCGGCAGCGTGCCCTTCGGCACGGAGCTCTACAACGAGCGTGGCGGC TCGCCGCTGCTGGTCAAGAAGCAGGTCGTGCTCACCGGAGACCGCCTCACCGACGCCCAGCCCGGCTTCGACGGCCAGAC CAACGAACCCGCGGTACACCTCACGCTCGATGCCGCCGGCGCGCGCATCTTCCGCGACGTCACGCGCGAGAGCGTCGGCA AGCGCATGGCCATCCTGCTGTTCGAGAAGGGCAAGGGCGAGGTCGTGACCGCGCCGGTGATCCGCAGCGAGATCGGCGGC GGGCGCGTGCAGATCTCCGGTCGCATGAGCACCGTCGAGGCCAACGACGTCGCGCTGCTGCTGCGCGCCGGCTCGCTGGC GGCGCCGATGGAGATCATCGAGGAGCGCACCGTCGGCCCAAGCCTCGGCGCGGAGAACATCCAGAAGGGCTTCAACTCGA CGTTGTGGGGCTTCCTCGCGATCGTCGTGTTCATGTGCGGTTACTACATGCTGGTGGGCCTGGTGTCCTCGATCGCGCTC GCCGCCAACCTGCTGCTGCTGGTGGCGCTGCTGTCGCTGCTGCAGGCCACGCTGACCCTGCCCGGCATCGCCGCGATGGC GCTGACCCTGGGCATGGCGATCGACTCCAACGTGCTGATCAACGAGCGCATCCGCGAGGAACTGCGCAACGGCGCCAGCC CGCAGGCGGCCATCGCGGCCGGTTACGACCGCGCCTGGGACACCATCCTCGACTCCAACATCACCACGCTGATCGCGGGC ATCGCGCTGCTGGTGTTCGGCTCCGGTCCGGTGCGCGGCTTCGCGGTGGTGCACTGCCTGGGCATCCTGACCTCGATGTT CAGCGCGATCCTGGTGTCGCGGATGCTGATCAATTTCATCTACGGCCGTCGCCGCAAGGTCGAAAGCCTGTCGATCGGCC AGGTGTGGAAGCCGGATACGAAATAA Protein sequence : MNRYPLWKNLLIGLVLLWGLIYTLPNFYGEVPAVQVSSAKATLKLDTAATTDRIAGALKAAGIENTGIFSDATSVRARFK DTETQLRAKDVIEQTFNPDAADPSYVVALNLLSASPSWLTSIQALPMYLGLDLRGGVHFLLEVDMPGALVKRLDSTTGDL RTLMRDKSVRHAGITREGNTVVIRFRDAAQREAGRRAIFDSTTDLQLVERDDAADDLKLVATLTPQAQQTMRDFAIKQNI TTLHNRINELGVAEPVIQQQGAERIVVQLPGVQDVAKAKDILGRTATLEVRMVDDTPGAIEQALAGSVPFGTELYNERGG SPLLVKKQVVLTGDRLTDAQPGFDGQTNEPAVHLTLDAAGARIFRDVTRESVGKRMAILLFEKGKGEVVTAPVIRSEIGG GRVQISGRMSTVEANDVALLLRAGSLAAPMEIIEERTVGPSLGAENIQKGFNSTLWGFLAIVVFMCGYYMLVGLVSSIAL AANLLLLVALLSLLQATLTLPGIAAMALTLGMAIDSNVLINERIREELRNGASPQAAIAAGYDRAWDTILDSNITTLIAG IALLVFGSGPVRGFAVVHCLGILTSMFSAILVSRMLINFIYGRRRKVESLSIGQVWKPDTK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 2e-86 | 43 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 2e-86 | 43 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 2e-86 | 43 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 2e-86 | 43 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 7e-87 | 43 |
