|
Name : secF (Sbal223_1573) Accession : YP_002357501.1 Strain : Shewanella baltica OS223 Genome accession: NC_011663 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecF Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0341 EC number : - Position : 1840201 - 1841148 bp Length : 948 bp Strand : + Note : forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins f DNA sequence : ATGCTTGAAATTTTATCTTTAAAACATACGGTAAACTTCCTCCGTCATGCACTGCCTATCAGTATTATGTCGGCTGTATT GGTGCTGGGCTCGCTGGTTTCGCTAGCGACCAATGGCATCAACTGGGGGCTTGATTTCACTGGCGGCACCGTCGTTGAAA TGGAGTTCACTAATCCGGTCGATTTAAACGCCCTGCGGGTGCAACTGACGACGCCTGATTCTGAAGGCGCCATTGTGCAA AACTTCGGTTCTAGCCGTGACGTATTAGTACGTTTACAGGTGAAAGAAGGCGTTAAGAGTGACGTGCAAGTTAAGTCTGT CATGGAAGCTGCGCAGAAAGTTGATCCACAAGTTCAGCAGAAGCGTGTTGAGTTCGTTGGCCCACAAGTGGGTAAAGAAC TGGCTGAGCAAGGAGGTTTAGCGGTATTAGTCGCGCTTATCTGTATCATGATCTATGTGTCATTCCGTTTCGAATGGCGC CTAGCATTTGGTTCAGTGGCAGCACTGGCGCACGACGTGATCGTGACTTTAGGTGTGTTTTCGGTATTCCAATTGGAATT CGACTTGACCGTACTGGCGGGTCTATTGACGGTTGTGGGTTACTCACTCAACGATACTATCGTGGTATTTGACCGTATCC GTGAAAACTTCCTTAAGATGCGTAAAAGCGACCCTGAAGAAGTGGTTAACGTTTCAATTACTCAAACCATGAGCCGTACA ATCATTACTACAGGTACAACCTTAGTGGTGGTCGTAGCCTTGTTCCTTAAGGGCGGCACTATGATCCATGGCTTTGCGAC TGCATTGCTGATGGGTATTTTTGTGGGTACGTATTCTTCTATCTATGTGGCGAGTTTCTTGGCCATTAAACTGGGTATTA ATCGTGAACACATGATGCCAGTTGAGATTGAGAAAGAAGGCGCAGACCAACCTCCTATGATGCCTTAA Protein sequence : MLEILSLKHTVNFLRHALPISIMSAVLVLGSLVSLATNGINWGLDFTGGTVVEMEFTNPVDLNALRVQLTTPDSEGAIVQ NFGSSRDVLVRLQVKEGVKSDVQVKSVMEAAQKVDPQVQQKRVEFVGPQVGKELAEQGGLAVLVALICIMIYVSFRFEWR LAFGSVAALAHDVIVTLGVFSVFQLEFDLTVLAGLLTVVGYSLNDTIVVFDRIRENFLKMRKSDPEEVVNVSITQTMSRT IITTGTTLVVVVALFLKGGTMIHGFATALLMGIFVGTYSSIYVASFLAIKLGINREHMMPVEIEKEGADQPPMMP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secF | AAT96102.1 | SecF | Not tested | T-PAI | Protein | 1e-47 | 47 |
| secF | AAT96066.1 | SecF | Not tested | T-PAI | Protein | 4e-48 | 47 |
