Gene Information

Name : Sbal223_4159 (Sbal223_4159)
Accession : YP_002360053.1
Strain : Shewanella baltica OS223
Genome accession: NC_011663
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-24 subunit
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 4938818 - 4939324 bp
Length : 507 bp
Strand : +
Note : TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: ppg:PputGB1_0695 ECF subfamily RNA polymerase sigma-24 factor

DNA sequence : 
ATGGCGTCGGTCAATATTTCTTCTCCTATCAATAACCTATATAGAGATAACCAGTTTTGGCTACGCGGCTGGCTATACTC
ACGCGTGGGTTGTTCAGAAACAGCGGCCGACCTAGCCCAAGATACATTTCTACGTTTGTTAAAAACCGGAAATTTACCGC
CCTCAGGCGAATCGCGGCGTTTTTTAACTCGCATTGCCAAAGGATTGATGATTGATGCTTATCGTCGGCAGAAGATTGAA
GAAGCCTACCTAGAAAGTTTGAGCTTGATGCCAGAAACCTTCATTCCTGGGCCAGAGATCCATCATGTCATCATTGAAAC
ACTCGCTGAAATTGCCGTTATGCTCGATAACTTGCCGGATAATGTGCGCTTGACGCTGTTACTGCGCCAGATAGAGGGTT
TAAGCTATGCCGATATTGCTAAGCAACTATCAGTTTCTGTTTCATCGGTAGAAAAGTATGTTGCGCGAGGCTTAGCGGCC
TGCTGCCTCGCGCTGGAATCCTATTAG

Protein sequence : 
MASVNISSPINNLYRDNQFWLRGWLYSRVGCSETAADLAQDTFLRLLKTGNLPPSGESRRFLTRIAKGLMIDAYRRQKIE
EAYLESLSLMPETFIPGPEIHHVIIETLAEIAVMLDNLPDNVRLTLLLRQIEGLSYADIAKQLSVSVSSVEKYVARGLAA
CCLALESY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 4e-31 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal223_4159 YP_002360053.1 ECF subfamily RNA polymerase sigma-24 subunit VFG1049 Protein 2e-31 43