Gene Information

Name : Msil_R0043 (Msil_R0043)
Accession : -
Strain : Methylocella silvestris BL2
Genome accession: NC_011666
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2446870 - 2448344 bp
Length : 1475 bp
Strand : -
Note : RNAmmer 1.2, Lagesen et al., Nucleic Acids Res. Apr2 2, 2007

DNA sequence :
AGAGTTTGATCCTGGCTCAGAACGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAACGCTGTAGCAATACAGAGTGG
CAGACGGGTGAGTAACACGTGGGAACATACCCTTCGGTTCGGAACAACTCAGGGAAACTTGAGCTAATACCGGATACGCC
CTTTGGGGGAAAGATTTATCGCCGAAGGATTGGCCCGCGTCTGATTAGCTAGTTGGCGGGGTAATGGCCCACCAAGGCGA
CGATCAGTAGCTGGTCTGAGAGGATGATCAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAGTG
GGGAATATTGGACAATGGGCGCAAGCCTGATCCAGCCATGCCGCGTGAGTGATGAAGGCCTTAGGGTTGTAAAGCTCTTT
TACCTGGGAAGATAATGACGGTACCAGGAGAATAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGG
CTAGCGTTGTTCGGATTTACTGGGCGTAAAGCGCACGTAGGCGGATCTTTAAGTCAGGGGTGAAATCCCGGGGCTCAACC
TCGGAACTGCCTTTGATACTGGGGATCTCGAGTCCGGGAGAGGTGAGCGGAACTGCGAGTGTAGAGGTGAAATTCGTAGA
TATTCGCAAGAACACCAGTGGCGAAGGCGGCTCACTGGCCCGGTACTGACGCTGAGGTGCGAAAGCGTGGGGAGCAAACA
GGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGGATGCTAGCCGTTAGGCAGCTTGCTGCTTAGTGGCGCAGTTAA
CGCTTTAAGCATCCCGCCTGGGGAGTACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGG
AGCATGTGGTTTAATTCGAAGCAACGCGCAGAACCTTACCAGCTCTTGACATGTCCGGTTTGGTTTCCAGAGATGGATTC
CTTCAGTTAGGCTGGCCGGAACACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCA
ACGAGCGCAACCCTCGCCCTTAGTTGCCATCATTTAGTTGGGCACTCTAGGGGGACTGCCGGTGATAAGCCGAGAGGAAG
GTGGGGATGACGTCAAGTCCTCATGGCCCTTACGGGCTGGGCTACACACGTGCTACAATGGCGGTGACAGTGGGATGCTA
AGGGGCGACCCCTCGCAAATCTCAAAAAGCCGTCTCAGTTCGGATTGCGCTCTGCAACTCGAGCGCATGAAGGTGGAATC
GCTAGTAATCGTAGATCAGAACGCTACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTTG
GTTCTACCCGAAGGCGTTTTCTTAACCGCAAGGAGAGAGGCGACCACGGTAGGGTCAGCGACTGGGGTGAAGTCGTAACA
AGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCT

Protein sequence :
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-120 88.1
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-120 88.1
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-120 88.1
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-120 88.1
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-120 88.1
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-120 88.1