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Name : Msil_0438 (Msil_0438) Accession : YP_002360774.1 Strain : Methylocella silvestris BL2 Genome accession: NC_011666 Putative virulence/resistance : Unknown Product : cytochrome c assembly protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 479997 - 481979 bp Length : 1983 bp Strand : + Note : PFAM: cytochrome c assembly protein; KEGG: bid:Bind_2232 cytochrome c-type biogenesis protein CcmF DNA sequence : ATGATCGTCGAAACCGGCCATTACGCGCTTGTCCTTGCGCTGGCGCTCGCGCTCGTCAATTCCGTGCTGCCGATCTGGGG CTCGCTTGCGGGCGACCGCCGCCTAATGGCCGTCGCGCCGCCGGTCGCGATCATGAGCTTCCTGCTGATCGGCTATTCTT ACTTCGCGCTGACCTATGCGCATGTGACGTCTGATTTCTCGCTACTCAACGTGGTGGAGAATTCGCATTCGGCCAAGCCC CTGATTTACAAGATCAGCGGCGTCTGGGGCAATCACGAGGGCTCGATGCTTTTGTGGGTGCTGGTGCTGGCTCTGTTCGG CGCGGCGGTCGCGCTGTTTTCCAGCTCGATGCCTGAGGATTTGCGCGCCAATACACTCGCCGTCCAATCCTGGATCAGCG CCGCTTTCGTGCTGTTTATTCTTTTGACGTCGAATCCCTTCGCGCGGTTGGGCGCGCCGCCAGCCGAGGGCAACGACCTC AATCCGCTGCTGCAGGATCCCGGCCTCGCGATCCATCCGCCGCTGCTTTACCTTGGCTATGTCGGGCTTTCGATCACCTA TTCCTTCGCCGCCGCCGCGCTGATCTGCGGACGCATCGACGCCGTCTTCGCGCGCTTCGTTCGGCCATGGACGCTCGCCG CCTGGATCTGCCTGACGCTCGGCATCGCAATGGGGTCATACTGGGCCTATTACACGCTCGGCTGGGGCGGCTTCTGGTTC TGGGATCCAGTTGAAAACGCCTCGCTGATGCCTTGGCTCGCCGCTACCGCGCTGCTCCATTGCACAAGCGTCATGGAGAA GCGCGAGGCGCTGAAGATCTGGACGATTTTCCTCGCGATCCTCGCCTTTTCGCTGTCGCTGGTCGGCACCTTCCTGGTTC GCTCCGGCGTGCTCACCTCGGTGCATGCTTTCGCCACCGATCCGATGCGCGGCGTGTTCATTCTCTTGATTCTTGTGCTG TTTATCGGCGGTTCGCTGGTTCTGTTCGCGGCGCGCGCGGGCGGCCTGAAGCAGGGCGGGCTGTTCGCCCCGATCTCCCG CGAAGGCGCGATCGTCGTCAATAATCTGATCCTCTCGACCTGCTGCGCCACCGTCTTCGTCGGCACGCTCTATCCGCTCG CCCTCGAGGCGATGACGGGGGAAAAGATCTCGGTCGGCGCGCCCTTCTTCAATCTGACCTTTGTTCCGCTGTTCGTCCCG CTGTTCATCCTGATGCCGGTCGGCCAGATGCTCGCTTGGAAGCGCGGCGATCTGCTCGGCGCGGCGCAACGGCTGATCTA CGCCTTCGGCGCCGGCCTTCTGATGGCGGCGGCGCTGGCGGCGATCCACGGCGGTCCGGCCGTCAGCTTCATCCTTGGCG GTCTCGCCGCCTATGTCATCGTCGGCGCCTTCACCGATATCGGCAGGCGCCTCATTAGCGCCGGCGCGTCGCCCGCCTTG ATGCTGCGGCGCCTGTCGGGGCTGCCGCGACAGGCGTTCGGAACGGCCTTCGCCCATGCGGGCATCGGCGTCACGCTGCT CGGCCTTGCGGCCTCCGGCTGGGGCGTCGAAAAGATCACCACCTTGCGTCCGGGCGATTCGCTCGACGTCGGGCCGTTTC AATTGACGCTGCAGGAGATCGCCAAGCGCGAGGGGCCGAATTACTCGGAGATTTTTGCAACGACGGTGATCCGCTCCGGA GGCGTCGTCGCCGCTGTGGTCGAGCCATCGCTGCGCTCCTATCCGACCCGGCGCAGCAACAGAACGGAAGCCGGCATCGC CACGCTTTCTTTGGGCCAAGTCTATATCAGCATCGGCGGCCTCGAACCCGACGGCAGAGTCGACGCGCGTATTTTCTGGA AGCCGCTCGTCTCGCTGATCTGGGGCGGCGCGCTGATCATGGCCTTCGGCGGCGCGCTGTCTTTAAGCGACATGCGGCTT CGCGTCGGCGTCGGCCGCCGCGCGCGAAAGCCGGTCGCGCCGCAAGCCGCGCCGGCGGAATGA Protein sequence : MIVETGHYALVLALALALVNSVLPIWGSLAGDRRLMAVAPPVAIMSFLLIGYSYFALTYAHVTSDFSLLNVVENSHSAKP LIYKISGVWGNHEGSMLLWVLVLALFGAAVALFSSSMPEDLRANTLAVQSWISAAFVLFILLTSNPFARLGAPPAEGNDL NPLLQDPGLAIHPPLLYLGYVGLSITYSFAAAALICGRIDAVFARFVRPWTLAAWICLTLGIAMGSYWAYYTLGWGGFWF WDPVENASLMPWLAATALLHCTSVMEKREALKIWTIFLAILAFSLSLVGTFLVRSGVLTSVHAFATDPMRGVFILLILVL FIGGSLVLFAARAGGLKQGGLFAPISREGAIVVNNLILSTCCATVFVGTLYPLALEAMTGEKISVGAPFFNLTFVPLFVP LFILMPVGQMLAWKRGDLLGAAQRLIYAFGAGLLMAAALAAIHGGPAVSFILGGLAAYVIVGAFTDIGRRLISAGASPAL MLRRLSGLPRQAFGTAFAHAGIGVTLLGLAASGWGVEKITTLRPGDSLDVGPFQLTLQEIAKREGPNYSEIFATTVIRSG GVVAAVVEPSLRSYPTRRSNRTEAGIATLSLGQVYISIGGLEPDGRVDARIFWKPLVSLIWGGALIMAFGGALSLSDMRL RVGVGRRARKPVAPQAAPAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 8e-93 | 45 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 4e-82 | 44 |
