Gene Information

Name : EFER_1989 (EFER_1989)
Accession : YP_002383117.1
Strain : Escherichia fergusonii ATCC 35469
Genome accession: NC_011740
Putative virulence/resistance : Virulence
Product : propanediol utilization protein PduJ/pduA
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 2045845 - 2046174 bp
Length : 330 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 10768928, 9370271, 9573168, 11964144, 4295288; Product type ps : structure

DNA sequence : 
GTGTCACGGACGGTTTTCCTGAATCACAAAACCTGTTCTGAGGAGATCACCATGGGTGATGCATTAGGGCTTATCGAAAC
CAAAGGCCTGGTGGCCTGTATTGCCGCAGCGGATGCGATGTGTAAATCCGCCAACGTTGAACTGATTGGCTATGAAAACA
TCGGCTCTGGTCTGGTGACCGTGATGGTGAAAGGCGACGTTGGCGCAGTGAAAGCATCTGTCGATTCTGGACTTGAGTCC
GCACAGCACATCGGGGAAGTGGTGACGTCGCTGGTTATCGCGCGTCCTCACAACGACATCAACAAAATCGTTATTAAACA
TAAGGCTTAA

Protein sequence : 
MSRTVFLNHKTCSEEITMGDALGLIETKGLVACIAAADAMCKSANVELIGYENIGSGLVTVMVKGDVGAVKASVDSGLES
AQHIGEVVTSLVIARPHNDINKIVIKHKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 3e-36 100
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 5e-32 90
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 4e-30 82

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EFER_1989 YP_002383117.1 propanediol utilization protein PduJ/pduA VFG1598 Protein 1e-36 100
EFER_1989 YP_002383117.1 propanediol utilization protein PduJ/pduA VFG1597 Protein 2e-32 90
EFER_1989 YP_002383117.1 propanediol utilization protein PduJ/pduA VFG1596 Protein 2e-30 82