Gene Information

Name : EFER_1990 (EFER_1990)
Accession : YP_002383118.1
Strain : Escherichia fergusonii ATCC 35469
Genome accession: NC_011740
Putative virulence/resistance : Virulence
Product : propanediol utilization protein pduA/pduJ
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 2046192 - 2046476 bp
Length : 285 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 12007656, 8071226, 9352910, 10498708; Product type ps : structure

DNA sequence : 
ATGGGTGATGCATTAGGTCTGATTGAAACCAAAGGTTTGGTGGCTTGTATTGAAGCAGCTGACGCGATGTGTAAGGCCGC
CAACGTTGAGTTGATTGGCTATGAAAACGTCGGTTCTGGTCTGGTCACCGCAATGGTGAAAGGTGATGTCGGCGCAGTAA
AAGCGGCGGTGGATTCCGGTGTTGAGTCCGCACAGCGCATTGGCGAGGTGGTGACATCGTTGGTTATCGCGCGTCCACAC
AATGACATCAACAAGATTGTCTCGCACTACAAAATTACCGATTAA

Protein sequence : 
MGDALGLIETKGLVACIEAADAMCKAANVELIGYENVGSGLVTAMVKGDVGAVKAAVDSGVESAQRIGEVVTSLVIARPH
NDINKIVSHYKITD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 4e-29 100
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 5e-24 90
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 3e-24 90

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EFER_1990 YP_002383118.1 propanediol utilization protein pduA/pduJ VFG1597 Protein 2e-29 100
EFER_1990 YP_002383118.1 propanediol utilization protein pduA/pduJ VFG1598 Protein 1e-24 90
EFER_1990 YP_002383118.1 propanediol utilization protein pduA/pduJ VFG1596 Protein 2e-24 90