Gene Information

Name : EFER_2008 (EFER_2008)
Accession : YP_002383132.1
Strain : Escherichia fergusonii ATCC 35469
Genome accession: NC_011740
Putative virulence/resistance : Virulence
Product : propanediol utilization protein, polyhedral bodies (pduA-like)
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 2061443 - 2061727 bp
Length : 285 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 10498708; Product type ps : structure

DNA sequence : 
ATGCAACAAGAAGCATTAGGAATGGTAGAAACCAAAGGGTTAACCGCAGCAATTGAAGCGGCTGATGCCATGGTGAAGTC
TGCCAATGTGCTGCTGGTCGGCTACGAAAAAATCGGCTCAGGACTGATCACCGTAATCGTGCGTGGCGATGTCGGTGCAG
TAAAAGCAGCCACAGATGCAGGTTCTGCCGCCGCACGCAATGTAGGCGAAGTTAAAGCTGTTCACGTCATCCCACGCCCT
CACACCGACGTAGAAAAAATCTTACCGAAGGGAATTAACCCATGA

Protein sequence : 
MQQEALGMVETKGLTAAIEAADAMVKSANVLLVGYEKIGSGLITVIVRGDVGAVKAATDAGSAAARNVGEVKAVHVIPRP
HTDVEKILPKGINP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 2e-22 66
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 9e-22 64
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-21 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EFER_2008 YP_002383132.1 propanediol utilization protein, polyhedral bodies (pduA-like) VFG1596 Protein 7e-23 66
EFER_2008 YP_002383132.1 propanediol utilization protein, polyhedral bodies (pduA-like) VFG1598 Protein 4e-22 64
EFER_2008 YP_002383132.1 propanediol utilization protein, polyhedral bodies (pduA-like) VFG1597 Protein 8e-22 62