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Name : ccmF (EFER_2286) Accession : YP_002383402.1 Strain : Escherichia fergusonii ATCC 35469 Genome accession: NC_011740 Putative virulence/resistance : Unknown Product : heme lyase, CcmF subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 2345204 - 2347147 bp Length : 1944 bp Strand : - Note : Evidence 1b : Function experimentally demonstrated in the studied species; PubMedId : 10339610, 11756453, 12196152, 87260957, 8842153, 91194558, 95362656, 9716493, 7635817; Product type e : enzyme DNA sequence : ATGATGCCAGAAATTGGTAACGGACTGCTGTGCCTGGCGCTAGGAATTGCGCTGTTGCTGTCCGTGTATCCGCTATGGGG CGTGGCGCGCGGGGATGCGCGCATGATGGCTTCTTCGCGCTTGTTTGCCTGGCTGCTATTTATGTCTGTGGCTGGCGCAT TTCTGGTGCTGGTCAATGCTTTCGTGGTGAATGACTTTACTGTCACCTATGTTGCCAGCAACTCCAATACCCAGCTTCCG GTGTGGTATCGCGTGGCGGCAACCTGGGGTGCGCATGAAGGCTCGCTACTGCTGTGGGTGCTGCTGATGAGCGGCTGGAC ATTTGCGGTGGCGATTTTTAGTCAGCGTATTCCGCTGGATATTGTGGCCCGTGTACTGGCGATAATGGGGATGGTCTGTG TCGGCTTTTTGCTGTTCATTCTCTTTACCTCTAACCCGTTCTCACGCACGCTGCCGAATTTCCCGATTGAAGGTCGCGAT CTTAACCCGCTGTTGCAGGATCCGGGGCTGATCTTCCACCCGCCCCTGCTCTATATGGGGTACGTCGGTTTCTCGGTGGC GTTTGCTTTCGCCATTGCTTCTTTGTTGAGTGGGCGTCTGGACAGCACCTATGCGCGTTTTACCCGCCCGTGGACGCTGG CAGCGTGGATCTTCCTGACGCTCGGCATTGTGCTCGGTTCCGCATGGGCCTATTACGAACTCGGCTGGGGCGGCTGGTGG TTCTGGGATCCGGTAGAAAACGCCTCGTTTATGCCGTGGCTGGTGGGGACTGCGCTGATGCACTCACTGGCGGTCACTGA ACAACGCGCCAGCTTCAAAGCGTGGACATTACTGCTGGCAATCAGTGCCTTCTCGTTGTGTCTGTTGGGGACTTTCCTCG TGCGTTCCGGCGTGCTGGTATCGGTACACGCGTTTGCGTCTGATCCGGCGCGCGGTATGTTTATCCTCGCCTTTATGGTG CTGGTGATTGGCGGTTCGCTGCTGCTGTTTGCCGCGCGTGGACACAAAGTTCGCTCACGCGTAAACAATGCGCTGTGGTC GCGGGAATCTTTGCTGTTAGCGAACAACGTTTTGCTGGTCGCCGCGATGCTGGTGGTGTTGCTGGGGACGCTGCTGCCGC TGGTGCACAAGCAACTGGGACTGGGCAGCATTTCGATTGGCGAACCGTTCTTCAACACTATGTTTACCTGGCTGATGGTG CCGTTTGCGCTACTGCTTGGTGTCGGTCCACTGGTGCGCTGGGGGCGCGATCGCCCACGTAAAATCCGCAATTTATTGAT TATCGCTTTCATCTCTACGCTGGTGTTGTCGCTGATAGTGCCGTGGCTGTTCGAAAGCAAAGTTGTGGCGATGACGGTGC TCGGCCTGGCAATGGCCTGCTGGATTGCGGTGCTGGCAATTGCGGAAGCTGCGCTGCGTATTTCACGCGGCACGAAAACC ACCTTCAGTTATTGGGGAATGGTGGCGGCTCATCTGGGGCTGGCAGTGACAATTGTTGGTATTGCCTTTAGCCAGAACTA TAGCGTTGAGCGTGATGTGCGCATGAAGTCCGGCGATAGCGTCGATATTCATGAATATCGCTTCACCTTCCGTGATGTCA AAGAAGTGACTGGTCCGAACTGGCGCGGCGGTGTGGCGACTATCGGCGTAACGCGAGATGGCAAGCCGGAAACGGTGCTG TATGCGGAAAAACGTTATTACAACACAGCCGGGTCGATGATGACAGAAGCAGCGATTGATGGTGGGATCACGCGTGACCT GTACGCAGCGCTCGGTGAAGAGTTGGAAAACGGTGCGTGGGCTGTGCGCCTTTACTACAAACCGTTTGTTCGCTGGATCT GGGCGGGCGGGCTGATGATGGCGTTGGGCGGACTGCTGTGTCTGTTTGATCCTCGCTATCGTAAGCGCGTGAACCCGCAA AAAACTGCGCCGGAGGCTGTATGA Protein sequence : MMPEIGNGLLCLALGIALLLSVYPLWGVARGDARMMASSRLFAWLLFMSVAGAFLVLVNAFVVNDFTVTYVASNSNTQLP VWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDIVARVLAIMGMVCVGFLLFILFTSNPFSRTLPNFPIEGRD LNPLLQDPGLIFHPPLLYMGYVGFSVAFAFAIASLLSGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAWAYYELGWGGWW FWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLLGTFLVRSGVLVSVHAFASDPARGMFILAFMV LVIGGSLLLFAARGHKVRSRVNNALWSRESLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMV PFALLLGVGPLVRWGRDRPRKIRNLLIIAFISTLVLSLIVPWLFESKVVAMTVLGLAMACWIAVLAIAEAALRISRGTKT TFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDSVDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKPETVL YAEKRYYNTAGSMMTEAAIDGGITRDLYAALGEELENGAWAVRLYYKPFVRWIWAGGLMMALGGLLCLFDPRYRKRVNPQ KTAPEAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 0.0 | 86 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 2e-127 | 54 |
