Gene Information

Name : cchA (EFER_0722)
Accession : YP_002381901.1
Strain : Escherichia fergusonii ATCC 35469
Genome accession: NC_011740
Putative virulence/resistance : Virulence
Product : carboxysome-like ethanolaminosome structural protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 741683 - 741976 bp
Length : 294 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 16291677, 10464203; Product type ps : structure

DNA sequence : 
ATGGAAGCATTAGGAATGATCGAAACCCGGGGCCTGGTTGCACTGATTGAGGCTTCTGACGCGATGGTGAAAGCTGCGCG
CGTCAAGCTGGTTGGTGTTAAGCAGATTGGCGGCGGCCTGTGTACTGCCATGGTTCGTGGTGATGTTGCAGCCTGTAAAG
CGGCGACCGATGCCGGTGCCGCAGCGGCGCAGCGTATCGGCGAGCTGGTATCTGTACACGTTATCCCGCGTCCGCACGGC
GACCTGGAAGAGGTCTTCCCGATCGGCCTGAAAGGCGATAGCAGCAACCTGTAA

Protein sequence : 
MEALGMIETRGLVALIEASDAMVKAARVKLVGVKQIGGGLCTAMVRGDVAACKAATDAGAAAAQRIGELVSVHVIPRPHG
DLEEVFPIGLKGDSSNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 2e-14 62
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 6e-14 61
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-12 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cchA YP_002381901.1 carboxysome-like ethanolaminosome structural protein VFG1596 Protein 9e-15 62
cchA YP_002381901.1 carboxysome-like ethanolaminosome structural protein VFG1597 Protein 2e-14 61
cchA YP_002381901.1 carboxysome-like ethanolaminosome structural protein VFG1598 Protein 7e-13 56