Gene Information

Name : cspF (ECIAI1_1601)
Accession : YP_002387033.1
Strain : Escherichia coli IAI1
Genome accession: NC_011741
Putative virulence/resistance : Unknown
Product : cold shock protein; Qin prophage
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 1679878 - 1680090 bp
Length : 213 bp
Strand : +
Note : Evidence 1b : Function experimentally demonstrated in the studied species; PubMedId : 9484881, 8022261, 9439003; Product type h : extrachromosomal origin

DNA sequence :
TTGTCCCGTAAAATGACAGGAATTGTCAAAACCTTTGACGGCAAAAGCGGCAAGGGTCTTATCACCCCATCCGATGGTCG
TATCGATGTCCAGCTTCATGTCTCAGCGCTCAATCTCCGCGATGCAGAAGAAATTACCACCGGATTACGCGTGGAATTTT
GCCGGATAAATGGTCTGCGTGGCCCTTCAGCTGCCAATGTTTACCTTTCATGA

Protein sequence :
MSRKMTGIVKTFDGKSGKGLITPSDGRIDVQLHVSALNLRDAEEITTGLRVEFCRINGLRGPSAANVYLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cspH YP_216241.1 cold shock protein-like protein Not tested SPI-11 Protein 8e-21 75
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 8e-06 45