Gene Information

Name : ccmH (ECIAI1_2276)
Accession : YP_002387675.1
Strain : Escherichia coli IAI1
Genome accession: NC_011741
Putative virulence/resistance : Unknown
Product : heme lyase, CcmH subunit
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG4235
EC number : -
Position : 2350307 - 2351359 bp
Length : 1053 bp
Strand : -
Note : Evidence 1b : Function experimentally demonstrated in the studied species; PubMedId : 10339610, 11756453, 12196152, 87260957, 91194558, 95362656, 9914305, 7635817; Product type pe : putative enzyme

DNA sequence :
ATGAGGTTTTTATTGGGCGTGCTGATGCTGATGATCTCCGGCTCAGCACTGGCGACCATCGACGTGTTGCAGTTTAAAGA
TGAAGCACAGGAACAACAGTTCCGTCAGCTCACTGAAGAACTGCGCTGCCCGAAATGCCAGAACAACAGCATTGCCGATT
CCAACTCGATGATTGCCACCGACCTGCGTCAGAAAGTGTATGAACTGATGCAGGAAGGTAAAAGTAAAAAAGAGATTGTC
GATTATATGGTGGCGCGTTACGGCAACTTCGTCACTTACGATCCGCCGTTAACGCCGCTGACCGTGCTGCTGTGGGTGCT
TCCGGTAGTGGCTATTGGCATTGGCGGTTGGGTCATATACGCCCGCTCGCGGCGTCGGGTACGCGTAGTGCCGGAAGCGT
TTCCTGAACAAAGCGTGCAGGAAGGTAAGCGTGCCGGATATATTGTTTATTTGCCGGGCATTGTGGTGGCGTTAATTGTG
GCTGGCGTCAGCTACTACCAGACCGGAAATTATCAGCAGGTGAAAATCTGGCAGCAGGCCACGGCACAGGCTCCGGCGTT
GCTGGACAGGGCGCTGGATCCGAAAGCCGATCCGCTCAACGAAGAAGAGATGTCGCGTCTTGCGCTGGGGATGCGTACTC
AACTGCAAAAAAATCCGGGAGATATAGAAGGCTGGATTATGTTGGGCCGCGTTGGCATGGCGCTGGGTAACGCTAGTATC
GCCACCGATGCATACGCTACTGCGTATCGCCTCGATCCGAAAAACAGCGATGCCGCACTGGGTTATGCTGAAGCGTTGAC
ACGTTCATCTGATCCCAACGACAACCGCCTCGGTGGTGAACTGCTGCGCCAGTTGGTGAGAAGCGACCACAGCAATATCC
GTGTGTTAAGCATGTATGCGTTTAATGCCTTTGAGCAGCAGCGATTTGGCGAAGCCGTTGCCGCGTGGGAGATGATGTTG
AAACTCTTACCTGCCAACGATACTCGCCGTGCGGTGATTGAACGTAGTATCGCGCAGGCGATGCAACATTTGTCGCCGCA
GGAGAGTAAATAA

Protein sequence :
MRFLLGVLMLMISGSALATIDVLQFKDEAQEQQFRQLTEELRCPKCQNNSIADSNSMIATDLRQKVYELMQEGKSKKEIV
DYMVARYGNFVTYDPPLTPLTVLLWVLPVVAIGIGGWVIYARSRRRVRVVPEAFPEQSVQEGKRAGYIVYLPGIVVALIV
AGVSYYQTGNYQQVKIWQQATAQAPALLDRALDPKADPLNEEEMSRLALGMRTQLQKNPGDIEGWIMLGRVGMALGNASI
ATDAYATAYRLDPKNSDAALGYAEALTRSSDPNDNRLGGELLRQLVRSDHSNIRVLSMYAFNAFEQQRFGEAVAAWEMML
KLLPANDTRRAVIERSIAQAMQHLSPQESK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmH YP_217239.1 heme lyase subunit, cytochrome c-type biogenesis Not tested SPI-12 Protein 3e-108 75