Gene Information

Name : ECS88_4677 (ECS88_4677)
Accession : YP_002394169.1
Strain : Escherichia coli S88
Genome accession: NC_011742
Putative virulence/resistance : Virulence
Product : propanediol utilization protein, polyhedral bodies (pduA-like)
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 4651254 - 4651586 bp
Length : 333 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 10498708; Product type ps : structure

DNA sequence : 
TTGCTATTCCTCTGTGCACGTTTTCTTTCTATCGGAAATATTGAGGTCGTTATGCAACAAGAAGCATTAGGAATGGTTGA
AACGAAAGGTCTGGTTTCTGCAATTGAAGCTGCAGATACCATGGTGAAATCTGCCAACGTGACCCTAGTGGGTTATGAAA
AAATCGGCTCCGGCTTGGTGACTGTGATGGTTCGCGGCGACGTTGGCGCAGTGAAAGCCGCGACAGATGCGGGCTCCGCT
GCTGCGAGTAAAGTGGGAGAACTGGTCTCCGTACATGTTATTCCACGCCCACACATTGAGGTGGAAAAAATTCTACCGAA
GGCTATCGGTTAA

Protein sequence : 
MLFLCARFLSIGNIEVVMQQEALGMVETKGLVSAIEAADTMVKSANVTLVGYEKIGSGLVTVMVRGDVGAVKAATDAGSA
AASKVGELVSVHVIPRPHIEVEKILPKAIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-16 64
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 2e-17 63
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 3e-16 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECS88_4677 YP_002394169.1 propanediol utilization protein, polyhedral bodies (pduA-like) VFG1598 Protein 9e-17 64
ECS88_4677 YP_002394169.1 propanediol utilization protein, polyhedral bodies (pduA-like) VFG1596 Protein 8e-18 63
ECS88_4677 YP_002394169.1 propanediol utilization protein, polyhedral bodies (pduA-like) VFG1597 Protein 1e-16 62