Gene Information

Name : cspB (ECS88_5017)
Accession : YP_002394483.1
Strain : Escherichia coli S88
Genome accession: NC_011742
Putative virulence/resistance : Unknown
Product : cold shock protein; Qin prophage
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 4968907 - 4969122 bp
Length : 216 bp
Strand : +
Note : Evidence 1b : Function experimentally demonstrated in the studied species; PubMedId : 94293754, 94293756, 9439003; Product type h : extrachromosomal origin

DNA sequence :
ATGTCAAATAAAATGACTGGTTTAGTAAAATGGTTTAACGCTGATAAAGGTTTTGGCTTTATTTCTCCTGTTGATGGTAG
TAAAGATGTGTTTGTGCATTTTTCTGCGATTCAGAATGATAATTTTCGAACCTTATTTGAAGGTCAAAAGGTTACCTTCT
CTGTAGAGAGTGGTGCTAAAGGTCCTGCAGCAGCAAATGTCATAATTACTGATTAA

Protein sequence :
MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNFRTLFEGQKVTFSVESGAKGPAAANVIITD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 3e-20 77
cspH YP_216241.1 cold shock protein-like protein Not tested SPI-11 Protein 1e-09 47