Gene Information

Name : VS_II1450 (VS_II1450)
Accession : YP_002396009.1
Strain :
Genome accession: NC_011744
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 1592199 - 1593146 bp
Length : 948 bp
Strand : +
Note : -

DNA sequence : 
ATGGATAAAAAAATAAAAATAGGCATTAGTGCATGTGTCGCCGGTCATAAAGTTCGGTTTGATACCGGCCATAAGCGTTC
TCGTTTTTGCACAGACGATCTTGCAGACTACGTAGAACTTGAGCCAGTTTGTCCAGAGATGGGGGTTGGCCTTCCATCGC
CTCGTCCTACGATCCGTCAAACAAGAATGTTAGACGACATTATCCATGTTTCTCGACCTGATGGTTCTGGCGATGTCACC
AACGAACTGATCGAGTTTGGGCAAAACTATTCAAAGAATAACCAACACATCGCAGGGTTCATTGTGTGTCAGAAAAGCCC
AACCTGTGGCATGGAGCGAGTAAAGGTTTACCACCACCACGGGCGTGGTTCTGAATCGACAGGCGTTGGCTTGTTTACTC
AACAGGTTATGCAAGGCAATCCCCTCCTTCCAGTAGAAGAAAATGGTCGCCTCAACGATCCAATTCTGCGTGAAAACTTT
ATGACTCGTGTTTTCACATATCAAAAGTGGCTCGATCTTGTTGATGAAGGTGTCACCAAACACAAGCTGATTCAATTTCA
CAGCGCTCACAAATATCTAGTGATGTGCCACCACATTGAAGGCTACAAGAGCCTAGGCAAACTTTTAGCGAGTAACGATT
TAGAGATTGATGAGCTGGCTGAAAAGTACATCGAAGGTCTGATGACGGCGCTAATGCACCATGCAAACCGCGGCAGTCAT
GCTAATACTCTGCATCACTTACAAGGTTACTTTAAGAAACAACTGAGCAGCGCTCACAAACAAGAGCTCACGAATCAGAT
TTCATCATTCAGAGAAGGGCTGGTTCCTCTGTTAGTTCCACTAACGCTGATTAACCACTATCTGATGGAATACCCAAACG
AGTACCTAGAGTCACAAGTTTATCTAAACCCGCACCCACAAGAACTTAAGCTGAGATACGGATATTGA

Protein sequence : 
MDKKIKIGISACVAGHKVRFDTGHKRSRFCTDDLADYVELEPVCPEMGVGLPSPRPTIRQTRMLDDIIHVSRPDGSGDVT
NELIEFGQNYSKNNQHIAGFIVCQKSPTCGMERVKVYHHHGRGSESTGVGLFTQQVMQGNPLLPVEENGRLNDPILRENF
MTRVFTYQKWLDLVDEGVTKHKLIQFHSAHKYLVMCHHIEGYKSLGKLLASNDLEIDELAEKYIEGLMTALMHHANRGSH
ANTLHHLQGYFKKQLSSAHKQELTNQISSFREGLVPLLVPLTLINHYLMEYPNEYLESQVYLNPHPQELKLRYGY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 5e-68 43
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 5e-68 43
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 4e-68 43
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 2e-68 43
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 3e-68 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VS_II1450 YP_002396009.1 hypothetical protein VFG0490 Protein 2e-68 43