Gene Information

Name : VS_II0996 (VS_II0996)
Accession : YP_002395576.1
Strain :
Genome accession: NC_011744
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3517
EC number : -
Position : 1102090 - 1103565 bp
Length : 1476 bp
Strand : -
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence :
ATGTCGGCAGAAGTACAAGCACCAGAACAAGAAGCAGCTCTAGTTGAATCAGGCTCACTTCTGGATAGCATTCTAAATGA
GACTCGCCTCAAGCCTAGCGACGAAGGTTTTGACGTTGCAAAGCGTGGCGTTGAAGCATTTATTGGTGAGTTGTTAAGCA
GCTCAACAGTAGAAAAAGTAGACCAATCGCTGGTTGATTTGATGATCTCTGAGATTGACCAGAAATTATCTAAGCAGGTT
GATGCAATTCTACACAATGAAGAAATTCAAGCTATTGAATCAACATGGCGCGGGCTCAAATATCTTGTTGATCACACGGA
CTTCCGTGAGAACATTCAAATCGAACTTATTTCGGCTAAGAAAGACGAAGTTCTGGACGATTTTGAAGATGCCCCTGAAG
TAGTTAAATCCGGTTTATACAAGCAGATCTATACTCGTGAGTATGGTCAATTTGGCGGTAAGCCTGTAGGCGCTGTTATT
TGTGACTACCAATTGTCTGCTTCTTCACCTGATATTAAGTTGATGGAATATATGGGTAATGTAGGAGCTATGTCTCATGC
ACCATTTATTACTTCGGCTTCTTCTCAATTCTTTGGTTTGGATTCTTATGAAGAATTACCAAATTTAAAAGATTTGAAAT
CGGTATTTGAAGGCCCTCAATATACTAAGTGGCGTGGATTCCGCGAACACGAAGACGCACGTTATGTAGGCCTGTGTACA
TCACGCTTTATGCTTCGTACTCCATATTCAGTTGAAGATAACCCAATTAAGGCGTTTGATTACGATGAAATGGTTACGGA
TAGCCACGATAACTACCTTTGGGGTAACTCAGCTTACGCGATGGCTTCAAAGATCAGTGAGTCGTTTGCAAAATACCGTT
GGTGTCCAAATATTATTGGACCTCAAAGCGGCGGTGCGGTTAACGATCTTCCGGTATACAACTTTGAAGCGATGGGCCAG
ATCGAAACTAAGATCCCAACTGAAATATTGGTTTCTGACCGTCGTGAGTACGAACTTGCAGAAGAAGGCTTTATGGCGTT
AACAATGCGCAAAGGTTCTGACAATGCAGCGTTTTTCTCGGCAAACTCAGTACAGAAGCCAAAAGTGTTTGCGAATACGC
CTGAAGGTAAGCAAGCTGAGATGAATTACAAGTTGGGTACTCAGTTACCTTACATGTTCATTATCAACCGCTTAGCCCAT
TACATCAAGGTACTTCAGCGTGAGCAAATAGGGTCTTGGAAAGAGCGTTCAGACCTTGAAGTCGAGCTAAATAAATGGAT
CCGTCAATACGTATCTGATCAAGAAAACCCGCCAGCAGAAGTTCGTGGTCGTCGACCATTGCGAGCGGCTAAAGTTGAAG
TGTCTGATGTTGAGGGTGACCCAGGTTGGTACAAAGTATCAATGTCTGTTCGCCCGCATTTCAAGTACATGGGTGCAAGC
TTTGACTTATCTTTGGTTGGTAAACTAGACCAATAA

Protein sequence :
MSAEVQAPEQEAALVESGSLLDSILNETRLKPSDEGFDVAKRGVEAFIGELLSSSTVEKVDQSLVDLMISEIDQKLSKQV
DAILHNEEIQAIESTWRGLKYLVDHTDFRENIQIELISAKKDEVLDDFEDAPEVVKSGLYKQIYTREYGQFGGKPVGAVI
CDYQLSASSPDIKLMEYMGNVGAMSHAPFITSASSQFFGLDSYEELPNLKDLKSVFEGPQYTKWRGFREHEDARYVGLCT
SRFMLRTPYSVEDNPIKAFDYDEMVTDSHDNYLWGNSAYAMASKISESFAKYRWCPNIIGPQSGGAVNDLPVYNFEAMGQ
IETKIPTEILVSDRREYELAEEGFMALTMRKGSDNAAFFSANSVQKPKVFANTPEGKQAEMNYKLGTQLPYMFIINRLAH
YIKVLQREQIGSWKERSDLEVELNKWIRQYVSDQENPPAEVRGRRPLRAAKVEVSDVEGDPGWYKVSMSVRPHFKYMGAS
FDLSLVGKLDQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 1e-162 61
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 1e-162 61
HH0247 NP_859778.1 hypothetical protein Not tested HHGI1 Protein 1e-157 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VS_II0996 YP_002395576.1 hypothetical protein VFG2093 Protein 1e-176 68
VS_II0996 YP_002395576.1 hypothetical protein VFG2475 Protein 4e-164 57
VS_II0996 YP_002395576.1 hypothetical protein VFG2070 Protein 3e-83 41