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Name : VS_II1006 (VS_II1006) Accession : YP_002395586.1 Strain : Genome accession: NC_011744 Putative virulence/resistance : Virulence Product : Chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1115052 - 1117745 bp Length : 2694 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in another organism; PubMedId : 16763151; Product type f : factor DNA sequence : ATGATAAATATAAACCTTTCCTCTTTGATACAGCGTCTGCACCCGATTGTAAAAGTCGCTTTAGAAGATGCTGCTGCATT AGCGGTATCGGAAAAAGCCAATGAAGTGCAAATTGAACACTATCTATTAAGCTTATTAGAAAGGCCAAATAGTGATTTTG ACATCTTATTAAGTCATTTCGATTGCTCAGAGACCATATTAAGACAATCTATTCGTTCTACGCTAAATACCAACACCACA GGAAATGGCAGCAAGCCCGTTTTCTCTTCACTTTTAATCGAATGGCTTCAAGAAAGTTGGTTAGTCTCGTCTTTAGACCT ATCCGAAACTCAGATTCGCTCTGGTGCCCTACTTCTTACGCTAGTGAGTAACCCACTACGCTATGGTCAGCACGGTTACG CTTCAATCTTAGAAGGTGTAAACCCAGACACCTTAAAACGTAACTTTTCTGAACTTACAACAAACTCTCTTGAATCTTTA GCAACGACATCTGAAAAAACCGACGCACGTGAAGATGGTTCGGCATTAAGTAAATTCACCACCGACTTTACCGGCAAAGC AAGAAAGGGCGAGATCGACCCAGTATTCTGCCGTGATCAAGAAATCAGACAAATAATCGACATCTTGGCGCGACGCAGAA AAAATAACCCAATCGCAGTAGGTGAGCCGGGAGTTGGTAAAACAGCGGTGGTAGAAGGTCTTGCTTTAAAAATTACCGAA GGAGATGTGCCAGACTGCCTCAAAGGTGTTGAACTATATGGCCTAGACATGGGCTTACTTCAAGCAGGAGCAAGTGTAAA AGGTGAATTTGAAAAACGCCTTAACGCAGTACTCGATGAAGTGAAGAATTCACCGACTCCAATCATTTTATTTATAGATG AAGCTCACACGCTAGTTGGTGGAGGCAATCAAGCTGGAGGCAGTGATGCTGCCAACCTACTTAAACCCGCTCTAGCACGT GGTGAAGTAAAAACAATCGCTGCCACCACATGGTCTGAATACAAGAAATATTTCGAAAAAGATCCAGCTCTGGCGCGCCG TTTCCAACTAGTAAAACTCGATGAGCCATCGGCTAGTCAAGCCGCATTGATCATCCGAGGCTTAAGACCAGCCTATGAAA AGTCACACAACGTATACGTACGTGACGACGCAATCACTGCCGCAGCAAACTTAGCTGATCGTTACATCACCGGACGCCAA CTGCCAGATAAAGCAATCGACGTGTTAGATACGGCTTGTGCTCGCGTCAATATTAGCCTCAATGCAACACCGGCACCTGT TGAAACATTACATCAAGAAATTGCGGCTGCGAATCGCGAGCTCGAAGCTCTAGAACGTGACCAACTGCAGCAAACGGGTG ACAAACACAGTGCCGCTTTAATTCCTGAGCTAAAAGAGAAGATTGAAAAGGCCACCGAAGAACAAGCTACCCTTCAGGTT CAATGGAAAAAAGAACAATCTCTTATTCAAGAGATCATAGAACTGCGTAGCCATCTTTATAGCCTTACTACTCCTTCGAC TGAAGAAGACAGCGCTCCTAAAGCTGACAATACGATTCAAGATGATGATGCACTAACAAGTGACAAACCAAATTGTCATG AATATTCTGAAGAGCAGACTCGTGAAGCTATTCAGTCTTGTAACGAACGTTTAGATAACGTGCGCGGTACCAATCCACTC GTTCACTATGAAGTGGGTCCCGACGAAATTAGTCATGTAATTTCTGATTGGACAGGCATCCCTATGGGTAAGATGCTTCA AGATGAGTCGCAAGCCACCTTAAACTTGAAGCAAAACCTAATTCAAAACATTAAAGGCCAAGAATTTGCCATTGATGCGC TTGCTGAAGGAATTCAAACCGCAAAAGCGGGATTAGGTAACCCAGATGCACCAACAGGCGTTTTCTTATTGGTTGGCCCA AGTGGTGTAGGTAAAACAGAAACCGCTCGTGCTATCGCCGACCAAATGTTTGGTGGTGAGCGCTTCATGACCACCATCAA CATGTCTGAGTTCCAAGAGAAACACACTGTGTCTCGCCTTATTGGTTCTCCTCCTGGCTATGTTGGTTTTGGTGAAGGCG GTATGCTGACCGAGGCAGTTCGTCAGCGCCCTTACTCTGTTGTTCTTTTAGATGAAGTTGAAAAAGCAGACCCAGAAGTA CTCAACCTGTTCTACCAAGTGTTCGACAAAGGCACGCTAAATGATGGCGAAGGTCGTACCATCGACTTCAAAAATACGCT CATCATCATGACGAGTAACCTCGCGACACATGAGATTGAGTCTTTGGTTCACCAAGCGAAAGACATTGATGCCAATATCG TCGCTGAAGCCATTCGCCCAACGTTGAATCAACACTTTAAGCCAGCCTTGTTGGCTCGTATGTCCGTGTTGCCATTCCTT CCACTTTCAGACGCGGCGATGACTGACATCATCCATCATAAACTGAAGAAAGTGTCTGAGCGCCTGCAAAGCCACCACAA ACTAGCACTTTGCTATGGTGATAACTTAGTAGAATTCGTATTAGGAAACTGCCGCCTTGCAGAGACGGGAGCACGAAATA TTGATGCCGTAATTAACCGTCAACTATTGCCGCAGCTTTCGACTCAACTATTGGTGAATGACAAGGATGATTCACATACT CAAATTGAAGTTTCTGTCGACGAGCAAGGAACTCTAACCTATGCGTTCAGCTAA Protein sequence : MININLSSLIQRLHPIVKVALEDAAALAVSEKANEVQIEHYLLSLLERPNSDFDILLSHFDCSETILRQSIRSTLNTNTT GNGSKPVFSSLLIEWLQESWLVSSLDLSETQIRSGALLLTLVSNPLRYGQHGYASILEGVNPDTLKRNFSELTTNSLESL ATTSEKTDAREDGSALSKFTTDFTGKARKGEIDPVFCRDQEIRQIIDILARRRKNNPIAVGEPGVGKTAVVEGLALKITE GDVPDCLKGVELYGLDMGLLQAGASVKGEFEKRLNAVLDEVKNSPTPIILFIDEAHTLVGGGNQAGGSDAANLLKPALAR GEVKTIAATTWSEYKKYFEKDPALARRFQLVKLDEPSASQAALIIRGLRPAYEKSHNVYVRDDAITAAANLADRYITGRQ LPDKAIDVLDTACARVNISLNATPAPVETLHQEIAAANRELEALERDQLQQTGDKHSAALIPELKEKIEKATEEQATLQV QWKKEQSLIQEIIELRSHLYSLTTPSTEEDSAPKADNTIQDDDALTSDKPNCHEYSEEQTREAIQSCNERLDNVRGTNPL VHYEVGPDEISHVISDWTGIPMGKMLQDESQATLNLKQNLIQNIKGQEFAIDALAEGIQTAKAGLGNPDAPTGVFLLVGP SGVGKTETARAIADQMFGGERFMTTINMSEFQEKHTVSRLIGSPPGYVGFGEGGMLTEAVRQRPYSVVLLDEVEKADPEV LNLFYQVFDKGTLNDGEGRTIDFKNTLIIMTSNLATHEIESLVHQAKDIDANIVAEAIRPTLNQHFKPALLARMSVLPFL PLSDAAMTDIIHHKLKKVSERLQSHHKLALCYGDNLVEFVLGNCRLAETGARNIDAVINRQLLPQLSTQLLVNDKDDSHT QIEVSVDEQGTLTYAFS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 3e-180 | 48 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 2e-180 | 48 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-143 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VS_II1006 | YP_002395586.1 | Chaperone ClpB | VFG2084 | Protein | 0.0 | 48 |
| VS_II1006 | YP_002395586.1 | Chaperone ClpB | VFG2076 | Protein | 7e-161 | 43 |
