Gene Information

Name : ECED1_0320 (ECED1_0320)
Accession : YP_002396378.1
Strain : Escherichia coli ED1a
Genome accession: NC_011745
Putative virulence/resistance : Unknown
Product : putative transposase ORF 1, IS66 family
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 336447 - 337853 bp
Length : 1407 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme

DNA sequence : 
ATGAACGACATCTCTTCTGACGACATCCTCCTGCTGAAACAGCGCCTGGCCGAACAGGAAGCGCTGATCCACGCCCTGCA
GGAAAAGCTGAGCAACCGGGAGCGCGAAATAGACCATCTGCAGGCGCAGCTGGATAAACTCCGCCGGATGAACTTCGGCA
GTCGTTCCGAAAAAGTCTCCCGCCGTATCGCACAAATGGAAGCCGATCTGAACCGGCTTCAGAAAGAGAGCGATACGCTG
ACTGGTAGGGTGTATGACCCGGCAGTACAGCGTCCGTTGCGTCAGACCCGCCCCCGTAAGCCGTTCCCTGAATCACTACC
CCGTGACGAAAAGCGACTGTTGCCTGCAGCGCCGTGCTGCCCGAACTGCGGCGGTTCACTGAGCTATCTGGGCGAGGATA
CCGCCGAACAGCTGGAGTTGATGCGTAGCGCCTTCCGGGTTATCCGGACGGTACGGGAAAAACATGCCTGTACTCAGTGC
GATGCCATCGTGCAGGCACCTGCACCTTCGCGGCCCATCGAGCGGGGTATCGCCGGACCGGGGCTGCTGGCCCGCGTGTT
GACCTCGAAGTATGCAGAGCACACCCCGCTGTATCGCCAGTCAGAAATATACGGCCGGCAAGGTGTGGAGCTGAGTCGTT
CACTGCTGTCGGGCTGGGTGGATGCATGCTGCCGGCTACTGTCACCGCTGGAAGAAGCGCTTCAGGACTATGTGCTGACT
GACGGTAAGCTCCATGCTGATGACACGCCTGTCCCGGTGCTGTTGCCAGGCAATAAGAAAACGAAGACCGGGCGGTTATG
GACCTACGTTCGTGACGACCGTAACGCCGGGTCAACGCTGGCGCCGGCGGTGTGGTTCGCTTACAGCCCGGACAGAAAAG
GCATCCATCCGCAGACCCATCTTGCGGGGTTCAGTGGTGTACTGCAGGCGGATGCATACGCCGGGTTCAACGAGCTGTAC
CGGGATGGCCGGATAACGGAAGCCGCCTGTTGGGCTCACGCCCGCCGTAAAATCCACGATGTGCACGTTCGCACCCCGTC
AGCCCTGACGGAGGAAGCGCTGAAACGGATCGGCGAACTGTACGCCATCGAGGCAGAGATAAGGGGAATGACGGCGGAGC
AGCGCCTTGCCGAACGTCAGTTGAAAACGAAACCGCTGCTGAAATCCCTGGAAAGCTGGCTGCGTGAAAAGATGAAAACC
CTGTCGCGTCACTCGGATACGGCGAAAGCGTTCGCATACCTGCTGAAACAGTGGGAGGCCCTGAACGTGTACTGCAGCAA
TGGCTGGGTGGAAATCGACAACAACATCGCAGAGAACGCCTTACGGGGTGTGGCCGTGGGCCGGAAGAACTGGTTGTGTG
TGTCACGAAGGAGAACTGATAGCGGCAATATGAAAATTGCAGCATAA

Protein sequence : 
MNDISSDDILLLKQRLAEQEALIHALQEKLSNREREIDHLQAQLDKLRRMNFGSRSEKVSRRIAQMEADLNRLQKESDTL
TGRVYDPAVQRPLRQTRPRKPFPESLPRDEKRLLPAAPCCPNCGGSLSYLGEDTAEQLELMRSAFRVIRTVREKHACTQC
DAIVQAPAPSRPIERGIAGPGLLARVLTSKYAEHTPLYRQSEIYGRQGVELSRSLLSGWVDACCRLLSPLEEALQDYVLT
DGKLHADDTPVPVLLPGNKKTKTGRLWTYVRDDRNAGSTLAPAVWFAYSPDRKGIHPQTHLAGFSGVLQADAYAGFNELY
RDGRITEAACWAHARRKIHDVHVRTPSALTEEALKRIGELYAIEAEIRGMTAEQRLAERQLKTKPLLKSLESWLREKMKT
LSRHSDTAKAFAYLLKQWEALNVYCSNGWVEIDNNIAENALRGVAVGRKNWLCVSRRRTDSGNMKIAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
l0015 CAD33775.1 L0015 protein Not tested PAI I 536 Protein 3e-160 97
unnamed AAL08460.1 unknown Not tested SRL Protein 1e-177 95
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 0.0 93
unnamed AAC31494.1 L0015 Not tested LEE Protein 0.0 93
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 0.0 93
tnp AEA34686.1 transposase Not tested Not named Protein 0.0 93
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 0.0 93
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 0.0 93
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 0.0 93
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 0.0 93
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 0.0 93
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 1e-175 92
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 0.0 91
unnamed AAL57570.1 unknown Not tested LEE Protein 0.0 91
s0025 CAD33772.1 IS66-like transposase Not tested PAI I 536 Protein 1e-120 68
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 1e-131 65
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 3e-122 63
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 7e-126 62
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 7e-126 62
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 3e-123 59
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 2e-123 59
tnp AEA34687.1 IS66 family transposase Not tested Not named Protein 1e-101 59
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 7e-114 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECED1_0320 YP_002396378.1 putative transposase ORF 1, IS66 family VFG1516 Protein 1e-160 97
ECED1_0320 YP_002396378.1 putative transposase ORF 1, IS66 family VFG1051 Protein 7e-178 95
ECED1_0320 YP_002396378.1 putative transposase ORF 1, IS66 family VFG0793 Protein 0.0 93
ECED1_0320 YP_002396378.1 putative transposase ORF 1, IS66 family VFG1513 Protein 7e-121 68
ECED1_0320 YP_002396378.1 putative transposase ORF 1, IS66 family VFG1736 Protein 3e-125 63