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Name : ECED1_4915 (ECED1_4915) Accession : YP_002400679.1 Strain : Escherichia coli ED1a Genome accession: NC_011745 Putative virulence/resistance : Unknown Product : putative N-acetylneuraminic acid outer membrane channel protein nanC Function : - COG functional category : - COG ID : - EC number : - Position : 4873192 - 4873932 bp Length : 741 bp Strand : + Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 15743943; Product type pm : putative membrane component DNA sequence : GTGATAAATATATTTAATGATGAGGCATTTATGAAAAAATATTATCCACTATTAACTGTAATTCTTCTTGGTTTACCTTT GTGCTCTCAGGCATTAACTCTTAATCTACGTGGGGGATACAGAAGCGCCAGTCACGCTTATGAAACGTTGATTCAGGTTA GTCAGGGGTGGAATAATGGTTGGTGGGCAAGTTTTGAGTCAAACACCTGGAATACAATTCACAACAATGAAAATGAATTG TTTGCACTCAATTATAATAAAATAGATATAAATAAAACATATAAAATAGATGACAAATGGGCTCTAATCCCAGGGATTCA GACACAATGGATGTCAGCAGGAAGTCAGTATAACCCTTATCTGAAAATTTCGTATCAGGCAACGCCAGATCTTAATCTGG CCTTACGCTATCGCTATGACTGGAAAGCTTTCCGACAGACGGATTTAGATGGCAACAGGGCGCGTAATGATCAGCATCAG TTTGATGGTTATGTGACATACAAAATTAATGATTCATGGTTGTTTGCATGGCAGACCACGGTATATACGAAGGTTAATAA TTTCAAATATGGGAATCATAAAAAAACAGCAACTGAAAATGCATTTGTTCTGCAATATAAAATGTCACCGGTGTTCACCC CATATATAGAATATGATTACCTGGATAAACAAGGGGTGTATAAGGGGAAAGATAATAAACATGAAAATAGTTACCGTGTC GGTGTTCTGATTAATTTTTAA Protein sequence : MINIFNDEAFMKKYYPLLTVILLGLPLCSQALTLNLRGGYRSASHAYETLIQVSQGWNNGWWASFESNTWNTIHNNENEL FALNYNKIDINKTYKIDDKWALIPGIQTQWMSAGSQYNPYLKISYQATPDLNLALRYRYDWKAFRQTDLDGNRARNDQHQ FDGYVTYKINDSWLFAWQTTVYTKVNNFKYGNHKKTATENAFVLQYKMSPVFTPYIEYDYLDKQGVYKGKDNKHENSYRV GVLINF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ECUMN_3381 | YP_002414052.1 | putative N-acetylneuraminic acid outer membrane channel protein nanC | Not tested | Not named | Protein | 7e-103 | 100 |
