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Name : cspE (ECUMN_0716) Accession : YP_002411476.1 Strain : Escherichia coli UMN026 Genome accession: NC_011751 Putative virulence/resistance : Unknown Product : cold shock protein CspE Function : - COG functional category : K : Transcription COG ID : COG1278 EC number : - Position : 770793 - 771002 bp Length : 210 bp Strand : + Note : member of the CspA family; constitutively expressed RNA/ssDNA-binding protein; functions in helping cells adapt to low temperature; aids nucleic acid melting; participates in gene regulation; can act as a transcription antiterminator DNA sequence : ATGTCTAAGATTAAAGGTAACGTTAAGTGGTTTAATGAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAA AGACGTGTTTGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAA TCACTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAA Protein sequence : MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANVIAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAO18076.1 | unknown | Not tested | TTSS locus | Protein | 3e-19 | 75 |
| cspH | YP_216241.1 | cold shock protein-like protein | Not tested | SPI-11 | Protein | 3e-07 | 49 |
