Gene Information

Name : VS_1326 (VS_1326)
Accession : YP_002416938.1
Strain :
Genome accession: NC_011753
Putative virulence/resistance : Virulence
Product : protein disaggregation chaperone
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1431277 - 1433889 bp
Length : 2613 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pf : factor

DNA sequence :
ATGACACAAGTAACGCTCACTAACTTAGTAGGCAAGCTAGCACCTGCCCTAAAGCAGGCGCTCGAAGCATCTGCTGGTTC
AGCAATGAACCAAGGTGTTGGAGCTATAGAGGTTGAACACTGGATTCTTCAACTTATCTCCCAGAAAGACCCAATGCTCA
TGACATTGTGTGAATCTCAGAAACTTTCAATAGATGCCTTAGTCAGTGAATTGACAAAGAAAATCTCTATGCTCCCAAAA
GGTAATGAAGGTCAACCGACGTTAAGCCACGGCTTAACGGAATTAATCAAAGACGCTTGGATGATTGCTTCAGTTAACTA
CGGGCATGGAGAGATCGTCAGCCTACACCTTATTCAAGCTCTAATGCAGCAAAATGTATTAGGTGTGACGACCTTACAAC
TTGAATCATTAAGCAATGTTTCACTTGAGTCTCTGCAAGGTCTTATCAAGAAAACTCCTATTGCACGTAACTCTTCAGCA
CCTTCAGCTAATGGCGCTGTCGATAGTACCCCCGCGGGTAACGACGCTCTAAGCAAATACACGGTAAACCTTACTCAGCA
GGCTATTGATGGCAACATCGACCCAATTTCAGGCCGTAATGCAGAAGTAAGAAAAGCGATTGACATCTTGTGTCGTAAGC
GCCAAAACAACCCGATTATGGTCGGTGAACCAGGCGTAGGTAAAACTGCTGTTGTTGAAGGATTAGCGTTAAGAATTGCA
GCCGATGAAGTCCCTAGTGCTCTACAAGGCGTACAGATCCACTCTTTAGACCTTGGCTTGCTGCAAGCCGGCGCGAGCGT
TAAAGGTGAGTTTGAAAACCGCTTAAAAGACGTCATCAATGAAGTAAAAAGCTCAGAAGTACCCATCATTGTATTTATCG
ATGAAGCTCACACCCTTATTGGTGCAGGCGGCGCTGCTGGACAAAACGACGCGGCAAACCTTCTAAAACCAGCCCTGGCG
CGTGGTGAGTTCAAAACCATCGCTGCGACAACATGGGCGGAATACAAAAAGTACTTCGAAAAAGATCCGGCTCTAACACG
CCGATTCCAAGTTGTGACCATTGAAGAGCCTAACGCAGAAGATGCGATGCAAATGCTTCGTGGTGTGGCTGCTTCATTGC
AAGCTCACCATGGCGCTTTTATTGCTGAATCCGCGATTGAAGCAGCGGTCAACTTATCGATCCGTTACCTTCCAAGTCGC
CAACTGCCAGACAAAGCCATTAGCCTACTTGATACTGCCAGTGCACGAATCGCACTGACACAAGGCGCGAAGCCAGAAGT
ATTGGAAACACTAGAGCAGACGATTCGTTATCAAGAAAACGAAAAATCAGCATTAGAAAAAGAAGAGGCACTGTTCTCCA
ACAGCGCTGAGTTGATTAAAGAGCTCACACTATCGATAGAAGAGAACCAACAAACGTTGGCTGCGTATTACACGCGTTGG
GAAAAAGAGATTGAATTAGTAGACCAAATTAAAGTGATTCAGCAAGAGATAACTGAAGCACAAGAGCTAAATGCGGTTGA
CTCCAACAAGCAGCAACAACTCGACGGCCTACGTATCGAGTTAGCAAACGTACAAGGTGAGGAGCCCCTCGTCTATGCCA
TGGTCGACGATAACACTATTGCTCAGGTGATTGCGAATTGGACTGGTATCCCGGTTGGTAACATGATGAGCGATGAAATC
GCTAAGCTGCTGACCTTGGAAGATGAACTTAATACTCGAGTAATAGGACAAGATGTCGCAAAGAACGAACTAGCAAAAGC
AATTCGTATTTCCCGAGCGGGTTTAACGGATAATCGAAAACCGATTGGTGTGTTCCTAATGTGTGGTCCAAGTGGTGTCG
GTAAAACTGAAACTGCCATGGCACTTGCGGAGCAACTGTACGGAGGAAGCAACGATCTTACTGTTATTAACATGACCGAG
TTTAAAGAGGAGCATAAAATTTCCATGCTACTCGGCTCACCAGCAGGTTACGTGGGCTTTGGCGAAGGTGGTGTATTGAC
GGAAGCGATTCGACGCAACCCTTATTCTGTATTGCTATTGGATGAGATGGAGAAGGCTCACCCTGGCGTACATGATCTGT
TCTATCAAATCTTCGATAAAGGTCATATCAAAGACAGCGAAGGTCGAACCGTCGATTTCAAGAACACCATCATTATTATG
ACGTCGAACGCTGCCGACCAAGCTATCTGTGACGTGTGTGCTCAGACTACCGATCGCATCGATAATGACAAGCTACTCGA
ATCAATACGTCCGGATCTGCAACAATACTTTAAACCTGCATTTTTAGGCCGAACTACCATTGTTCCCTACTACCCACTTA
ACGATGAAGAATTAGCGAAAATCACAGAAATATCGCTAAATCGAATCAAAAAGAAACTTGCAGAGCAATATAAGGCATCA
TTCACTTGGGATACGAATTTCATTCAGTTCGTGGTCGACCGTAATACCGATCCAACCACTGGCGGTCGCGCTGTAGAACA
AATTATTAACCGTTCACTGATGCCAAGATTAGCCGAAGAATGTATCGGGCGATTAAGCCGCAGCGAACCCATTACTCAAG
TAACAGTTAGTGCAACGAACAACAGTGCTGACTTCGATTTATCTATTAAGTAG

Protein sequence :
MTQVTLTNLVGKLAPALKQALEASAGSAMNQGVGAIEVEHWILQLISQKDPMLMTLCESQKLSIDALVSELTKKISMLPK
GNEGQPTLSHGLTELIKDAWMIASVNYGHGEIVSLHLIQALMQQNVLGVTTLQLESLSNVSLESLQGLIKKTPIARNSSA
PSANGAVDSTPAGNDALSKYTVNLTQQAIDGNIDPISGRNAEVRKAIDILCRKRQNNPIMVGEPGVGKTAVVEGLALRIA
ADEVPSALQGVQIHSLDLGLLQAGASVKGEFENRLKDVINEVKSSEVPIIVFIDEAHTLIGAGGAAGQNDAANLLKPALA
RGEFKTIAATTWAEYKKYFEKDPALTRRFQVVTIEEPNAEDAMQMLRGVAASLQAHHGAFIAESAIEAAVNLSIRYLPSR
QLPDKAISLLDTASARIALTQGAKPEVLETLEQTIRYQENEKSALEKEEALFSNSAELIKELTLSIEENQQTLAAYYTRW
EKEIELVDQIKVIQQEITEAQELNAVDSNKQQQLDGLRIELANVQGEEPLVYAMVDDNTIAQVIANWTGIPVGNMMSDEI
AKLLTLEDELNTRVIGQDVAKNELAKAIRISRAGLTDNRKPIGVFLMCGPSGVGKTETAMALAEQLYGGSNDLTVINMTE
FKEEHKISMLLGSPAGYVGFGEGGVLTEAIRRNPYSVLLLDEMEKAHPGVHDLFYQIFDKGHIKDSEGRTVDFKNTIIIM
TSNAADQAICDVCAQTTDRIDNDKLLESIRPDLQQYFKPAFLGRTTIVPYYPLNDEELAKITEISLNRIKKKLAEQYKAS
FTWDTNFIQFVVDRNTDPTTGGRAVEQIINRSLMPRLAEECIGRLSRSEPITQVTVSATNNSADFDLSIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 3e-155 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VS_1326 YP_002416938.1 protein disaggregation chaperone VFG2076 Protein 5e-177 43