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Name : potB (VS_1475) Accession : YP_002417087.1 Strain : Genome accession: NC_011753 Putative virulence/resistance : Unknown Product : spermidine/putrescine ABC transporter membrane protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1176 EC number : - Position : 1606886 - 1607743 bp Length : 858 bp Strand : + Note : can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotB is a membrane component DNA sequence : ATGAGCAAGAAGTTTAATTTACAAAACGCAATTGTTGCTTTAATCACAGGTTGGTTAGTGCTGTTCGTGATGATTCCAAA CATCATGATCATCGGTACTAGTTTCTTAACTCGTGATGAAGCTAACTTGATTGAGATGACTTTTACTCTCGATAACTATG TGCGTTTGGCTGATCCGCTGTATTTTAAAGTGCTGATGCACTCTTTCTATATGGCAATCGTAGCTACCCTGCTTTGTTTA ATTATTGGTTACCCGTTCGCCTATATCGTGGCAAAAATGCCTGCGAAATGGCGTCCAATCATGTTGTTTTTAGTGATTGT GCCATTTTGGACTAACTCACTGATTCGTACTTACGGATTAAAAGTGGTTCTGGGTACTCAAGGTGTGTTGAACAAAGGCT TGTTGGCGTTAGACATTATCGATAAGCCACTTCGTATTATGTATTCAGAAACGGCAGTAATGATCGGTTTAGTGTATATC CTACTCCCGTTCATGATTTTGCCGTTGTACTCAGCAATCGAAAAGCTAGACGACACTTATTTAGAAGCGGCTAAAGATTT AGGTGCGAACAAACTGCAAACGCTATTGAAAGTCGTGTTACCACTGACTATGCCAGGTATTGTCGGCGGTTGTTTATTGG TGTTATTACCTGCATTAGGTATGTTCTACATCTCTGACCTATTAGGCGGAGCAAAGAACCTGCTGATTGGTAACGTGATT AAGAGCCAAGTACTCAATGCTCGGGACTGGCCGTTTGGCGCTGCGACGAGTATTGCACTGACCGTGGCAATGGCTGTGAT GCTTTATGCCTACTACCGTGCAGGTAAGTTATTGAATAAGAAAGTGGAGCTAGACTAA Protein sequence : MSKKFNLQNAIVALITGWLVLFVMIPNIMIIGTSFLTRDEANLIEMTFTLDNYVRLADPLYFKVLMHSFYMAIVATLLCL IIGYPFAYIVAKMPAKWRPIMLFLVIVPFWTNSLIRTYGLKVVLGTQGVLNKGLLALDIIDKPLRIMYSETAVMIGLVYI LLPFMILPLYSAIEKLDDTYLEAAKDLGANKLQTLLKVVLPLTMPGIVGGCLLVLLPALGMFYISDLLGGAKNLLIGNVI KSQVLNARDWPFGAATSIALTVAMAVMLYAYYRAGKLLNKKVELD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| potB | BAA36746.1 | - | Not tested | LIM | Protein | 1e-89 | 68 |
