Gene Information

Name : rnhA (VS_2325)
Accession : YP_002417912.1
Strain :
Genome accession: NC_011753
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : -
Position : 2493790 - 2494254 bp
Length : 465 bp
Strand : +
Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids

DNA sequence :
ATGACGAAACAAGTTGAAATTTTCACTGATGGTTCTTGTTTAGGCAACCCAGGTCCTGGCGGCTACGGCATCGTACTTCG
CTACAGAAAAGTCGAGAAGACGTTAGCCGAAGGTTTCACCTTAACGACCAACAACCGTATGGAAATGCTCGCCGCTGTTG
TGGCTCTTCAAGCCCTCAAAGAGCCTTGCTCTGTCATTCTGACCACAGATAGCCAATACGTGCGTCAAGGTATCACCCAG
TGGATTCACAACTGGAAAAAGCGTGACTGGAAAACCGCTGACAAGAAACCGGTTAAAAACGCAGACCTGTGGCAAAGGCT
CGATAAAGAGACGGCGCGCCATAGCGTTGATTGGCGCTGGGTTAAGGGGCACGCGGGGCACCGAGAAAATGAAATGTGTG
ATGATTTAGCTCGAAGTGCAGCTGAAAACCCGACCCAAGAAGATACGGGCTATCAGCCAAGCTGA

Protein sequence :
MTKQVEIFTDGSCLGNPGPGGYGIVLRYRKVEKTLAEGFTLTTNNRMEMLAAVVALQALKEPCSVILTTDSQYVRQGITQ
WIHNWKKRDWKTADKKPVKNADLWQRLDKETARHSVDWRWVKGHAGHRENEMCDDLARSAAENPTQEDTGYQPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 9e-55 72