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Name : AFE_1296 (AFE_1296) Accession : YP_002425732.1 Strain : Acidithiobacillus ferrooxidans ATCC 23270 Genome accession: NC_011761 Putative virulence/resistance : Unknown Product : LysR family transcriptional regulator Function : - COG functional category : K : Transcription COG ID : COG0583 EC number : - Position : 1129497 - 1130459 bp Length : 963 bp Strand : + Note : identified by similarity to SP:Q47083; match to protein family HMM PF00126; match to protein family HMM PF03466 DNA sequence : ATGAACCTGCAACAGCTTCGTTTCATCTGCGCGGTGGTGCGCCAGAACTTCAATGCGTCGGCCGCCGCCGATAGCCTGTA TACCTCACAACCGGGGGTGAGCAAACAGATCCAACTCCTCGAAGAGGAGATCAATGTGGCGCTTTTCGTGCGCAAAGGGA AGCGCATCATCGGAATGACCCCGGCGGGTGAGCAGATATTCACTTTTGCACAGCGGGTAGTCGGCGATATCGAGAATATC CGAAAAGTAGGTCAGGAGTTTTCTCAGGGCGATCGTGGGGAATTTGTGATCGCCACCACCCATACTCAAGCCCGATACAG CTTGCCCAGGGCGATAAAGACCTTTACGGAACGCTACCCAGGGGTTCAGTTGCGCCTGCGCCAGGGCAATCCTACCCAGG TCGCGGAGATGCTTGCGGCGGGGGAGGCAGACGTGGCGGTCGCAACGGAGTCGTTGAATTCCTACGCGGGCCTTGTCGCC CTGCCCTGCTATCAGTGGAATCGCGTCGTTATCACACCCACCGGCCATCCGCTGCTGCAAAGCCAGCCACTGACGCTGGA AGCAGTCGCCGCCCATCCCATAGTAACCTACGACCAGGCCTTTGCAGGGCGCTCCCTGATCGACAAGACTTTCGCCAATC ACGGCCTGTCCCCCAACATCGTGCTTTCCGCCATAGACTCCGATGTCATCAAGGCGTATGTGGAACTGGGGTTGGGGATA GGCATCGTCGCCCAAATGGCTTATGACCCTGTACGGGACACAAAACTGGAGGTGATCGATGCGAGTCACCTGTTCGATCC CAGCACCACCTACCTGGCCTTGAGGCAGGGAACCTATTTACGCGGGTATCTATACACCTTCATAGCGTTATACGCGCCAC ACCTCGATCGCAACACGGTGGATCAGGCCCTGGATTCCACAGTTGCTTCCAGGGCGTTATTGGCGCCAGGTGGTAGCGCC TGA Protein sequence : MNLQQLRFICAVVRQNFNASAAADSLYTSQPGVSKQIQLLEEEINVALFVRKGKRIIGMTPAGEQIFTFAQRVVGDIENI RKVGQEFSQGDRGEFVIATTHTQARYSLPRAIKTFTERYPGVQLRLRQGNPTQVAEMLAAGEADVAVATESLNSYAGLVA LPCYQWNRVVITPTGHPLLQSQPLTLEAVAAHPIVTYDQAFAGRSLIDKTFANHGLSPNIVLSAIDSDVIKAYVELGLGI GIVAQMAYDPVRDTKLEVIDASHLFDPSTTYLALRQGTYLRGYLYTFIALYAPHLDRNTVDQALDSTVASRALLAPGGSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cbl | YP_853089.1 | transcriptional regulator Cbl | Not tested | PAI IV APEC-O1 | Protein | 8e-70 | 44 |
