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Name : secF (AFE_2056) Accession : YP_002426459.1 Strain : Acidithiobacillus ferrooxidans ATCC 23270 Genome accession: NC_011761 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecF Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0341 EC number : - Position : 1805316 - 1806329 bp Length : 1014 bp Strand : - Note : identified by similarity to SP:P19674; match to protein family HMM PF02355; match to protein family HMM PF07549; match to protein family HMM TIGR00916; match to protein family HMM TIGR00966 DNA sequence : GTGGCATCATCGAACTCGCCCTCGGCAAGCGGCGCGTGCAAAAGCTTTATATCTGAGGTCGCGATGGAACTTTTCAAAGT CCGTACCCATGTAGACTTCATGTCCAGACGCTGGATTTTTCTGGGCGTGTCCGCTCTGCTGATCATCGCCTCCGTCGCCG TTTTTCTGGTGCGGGGGCTGAATTACAGCATCGATTTCACCGGTGGTACGCTGGTGGAACTGGCATTCAGCAAGACGCCG GATCTGGGCGCGGTGCGGGGTACCCTCACCCAGGCGGGCTTCCACGATGCGGTAGTGCAGACCTTTGGTGGTGACCGCGA CCTGCTGATTCGCCTGCGCACCGTACCCGGTGAGAGCAGCGCCGTGGGCAATACGATTCTGCAGGTATTCCGGAAGGATC AAGTGGAGTATCCCGATGTGCAGTTGCGCCGCACCGAATATGTTGGTCCGGAGGTGGGTAAGGAATTGCGGAACAAGGGG ATCATGGCGCTGATCATCGTCACTCTGGGTATTCTGATTTATGTGGGGTTTCGCTTTGAGTGGCGTTTCGCCGTGGGCGG TGTGCTCGCCATGCTCCACGACCCGATCCTGGTGGTGGGCTTTTTCGCCATCAGCCACGAAGAGTTTTCCCTGACCGTGA TTGCGGCGTTGCTGGTGATCATGGGCTATTCCCTCAATGATACGGTGGTGGTTTTCGACCGTATGCGCGAGGATCTGCGG GCGTCCCGCAGCGGTGATGTGGCGCAGATATTCAACGTCGCCATCAACGAGACGCTATCCAGAACGGTGATCACCAGCTT CATCACCTTCATGGTCGCGCTTTCGCTCTTCCTTTTTGGTGGGCCGGTGATTCACGGGTTTGCCACGGCGCTGGTCATCG GCGTGGTGGTGGGTACCTATTCCTCGATTTTCGTCGCGAGCCCGATCGCACTGTGGCTGGGGCTCAAGCGGGAGCACGTC CTCAAACGTCAGTTCATCAGTGCCAAGGATCGTAACGACGGTGCGGCCTTGTAG Protein sequence : MASSNSPSASGACKSFISEVAMELFKVRTHVDFMSRRWIFLGVSALLIIASVAVFLVRGLNYSIDFTGGTLVELAFSKTP DLGAVRGTLTQAGFHDAVVQTFGGDRDLLIRLRTVPGESSAVGNTILQVFRKDQVEYPDVQLRRTEYVGPEVGKELRNKG IMALIIVTLGILIYVGFRFEWRFAVGGVLAMLHDPILVVGFFAISHEEFSLTVIAALLVIMGYSLNDTVVVFDRMREDLR ASRSGDVAQIFNVAINETLSRTVITSFITFMVALSLFLFGGPVIHGFATALVIGVVVGTYSSIFVASPIALWLGLKREHV LKRQFISAKDRNDGAAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secF | AAT96102.1 | SecF | Not tested | T-PAI | Protein | 5e-63 | 43 |
| secF | AAT96066.1 | SecF | Not tested | T-PAI | Protein | 2e-63 | 43 |
