|
Name : rnhA-2 (AFE_0399) Accession : YP_002424895.1 Strain : Acidithiobacillus ferrooxidans ATCC 23270 Genome accession: NC_011761 Putative virulence/resistance : Unknown Product : ribonuclease HI Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : 3.1.26.4 Position : 349706 - 350182 bp Length : 477 bp Strand : + Note : identified by match to protein family HMM PF00075 DNA sequence : ATGCCCGAAAAAATCATAGAGCTCTTTACCGATGGCGGGTGCCGCGGTAATCCCGGTATCGGCGCCTGGGGCGTGTGGCT GCGGCTGGCTGGACAGGAGCGGGTCTTGTGGGGCTTCGTCCCGGAAACGACGAACAACCGGATGGAGCTGACGGCGGCTT TGCGCGGTCTGGAGGCGCTCAAGCGACCCAGCGCCGTGCGGGTGATCAGTGATTCCCGTTATCTGCGGGATGGCATGACC CAGTGGCTGGCTGGCTGGCAGCGCCGGGGCTGGCGGACGGCGGGCGGGGACGCGGTCAAAAATCGCGATATCTGGGAGTT GTTGGCGGCGGTGGCCGCCCGCCACCAGGTCCAGTGGGAGTGGGTGAGAGGCCACTCCGGGCATATCGAGAATGAACGGG TGGACGCACTGCTGAATCGGGTCATGGATCAGTATGCGGCGGGCGGGCAGGCGCGGGAGGGCGAGGGATGGCTGTGA Protein sequence : MPEKIIELFTDGGCRGNPGIGAWGVWLRLAGQERVLWGFVPETTNNRMELTAALRGLEALKRPSAVRVISDSRYLRDGMT QWLAGWQRRGWRTAGGDAVKNRDIWELLAAVAARHQVQWEWVRGHSGHIENERVDALLNRVMDQYAAGGQAREGEGWL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 7e-31 | 52 |
