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Name : AFE_0670 (AFE_0670) Accession : YP_002425158.1 Strain : Acidithiobacillus ferrooxidans ATCC 23270 Genome accession: NC_011761 Putative virulence/resistance : Unknown Product : TrmH family RNA methyltransferase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0565 EC number : 2.1.1.- Position : 599805 - 600575 bp Length : 771 bp Strand : + Note : identified by match to protein family HMM PF00588; match to protein family HMM TIGR00050 DNA sequence : ATGATCGGGACGTCTTTGCAGGGCTTGCGTATTGTCCTTGTTGAACCCAGTCACCCCGGCAATATCGGGGCGGCGGCACG GGCCATGAAGGTGATGGGGTTGCGCCATCTGGTGCTGGTCAGTCCGCGCTTTTTCCCCGACCCGGAGGCCACGGCTCTCG CCTCCGGTGCCGAAGATATTCTGGAATCGGCGCAGGTCTGTACCAATCTGGATACGGCCCTGCAGGGTTGCCACAAGGTC TATGGCACCAGCGCCCGCGGTCGTCGTATCCAGTGGCCCGCCAGCAATGCGCGGGAGGCGGCGGGGGAGATCCTCGCGGA TCTGGACACGGGAGATTGTGCCCTGCTCTTCGGCCGGGAGCGGACGGGGCTGACCAATGCGGAGATGGATCGTTGTCAGG TGCTGGTGCATATCCCTACGGCGGATGAATACCACTCCCTGAATCTGGGGCAGGCGGTGCAGGTGCTTGCCTATGAGCTC CACATGGCCGCCCTGACGGCCCAGCCAGCGCAGGATGTGCCCGCAGAGGATGTGCCGGAGCAACCCGCCCCCATCGAGGA TATGGAAGGCTTTTATGGGCACTTGCAGCATGTGCTGCGCCGCAGTGGTTTTCTGCAGGAGATTCGCGCTACGCGCATGA TGCGTCGCTTGCGCCGTCTTTTCGACCGCGCCAGGCCGAGCCAGAACGAGGTGAACATCCTGCGCGGTATCCTTACCGAA ATCGAGCGCTGGGCGTCTAAAGTAGACAGAAAGGATCAGGATAGTCTTTAA Protein sequence : MIGTSLQGLRIVLVEPSHPGNIGAAARAMKVMGLRHLVLVSPRFFPDPEATALASGAEDILESAQVCTNLDTALQGCHKV YGTSARGRRIQWPASNAREAAGEILADLDTGDCALLFGRERTGLTNAEMDRCQVLVHIPTADEYHSLNLGQAVQVLAYEL HMAALTAQPAQDVPAEDVPEQPAPIEDMEGFYGHLQHVLRRSGFLQEIRATRMMRRLRRLFDRARPSQNEVNILRGILTE IERWASKVDRKDQDSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96063.1 | group 1 trmH family protein | Not tested | T-PAI | Protein | 4e-50 | 50 |
