Gene Information

Name : PLES_17991 (PLES_17991)
Accession : YP_002439403.1
Strain : Pseudomonas aeruginosa LESB58
Genome accession: NC_011770
Putative virulence/resistance : Virulence
Product : putative TonB-dependent receptor
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4772
EC number : -
Position : 1944672 - 1946837 bp
Length : 2166 bp
Strand : +
Note : -

DNA sequence :
ATGTCGTCCGTGAGTTCGTTGTCGCGCCTGGCCGTCGCCATCGCGCTGGGTGTGTCCATGCAGGCGGCGCAGGCCGAAGA
GGAAGCCAAGGAGCTGGGCACGGTCACCGTGGTCGGCGACTGGCTGGGCGAAGCCGACCAGGCGGTGGTGCAGAACCATC
CCGGTGCGCGCAGCGTGGTGCGTCGTCGGGAAATGCTCGAGAGCGGTGCGCAGAACGTCCGCGACGTGCTGCGCAAGGTG
CCCGGCGTGCAAGTGCAGGACAACAACGGTACCGGCGGCAGCGACATCTCCCTGAACGTCGGGGTGCGTGGCCTGACTTC
ACGCCTGTCGCCGCGCTCGACGGTGATGATCGACGGCGTGCCGGCGGCGGTGGCGCCCTACGGCCAGCCGCAGCTGTCGA
TGATGCCGCTGTCCATCGGCAACCTGGAGAGCATCGACGTCGTGCGCGGCGCCGGCTCGGTGCGCTACGGCCCGCAGAAC
GTCGGCGGGGTGATCAACTTCGTGACCCGGGCGATTCCGGAGAAGTTCTCCGGCGAAATCGGCACCACCATCGAGCATGC
CGGCCACGGCGGCTGGAAGAAGCTCAACCAGGCGTTCCTCGGCGGGACCGCCGACAACGGCCTGGGCGTGGCGCTGCTGT
ATTCCGGGGTGAAGGGCGCCGACTACCGCGACGGCAACAACGACAACGATATCGACGACGTGCTGCTCAAGACCCATTGG
CAGCTCACCGACAGCGACCAGTTGGCGGCCAACTTCCACTACTACGACGCCTACGCCGATATGCCGGGCGGCCTGACCCA
GGCGCAGTACGACGACGATCCCTTCCAGTCGGTGCGCGACTGGGACAACTTCCGTGGTCGGCGCAAGGACTTCTCGCTGA
AGTACACCCGCCAGGTCGACGACCTCACCCAGTTCGAGGTGCTCACCTACTACAGCGACAGTTTCCGCGGCAGCAGCATC
GCCGCGCGCAACCTCAGGACCATCACCTCGTACCCGCGCGACTACCATGTGTTCGCGGTGGAGCCGCGGGTCTCGCGGAT
CTTCTTCGCCGGCCCGACCACCCAGGAGATCGGCATCGGCTACCGCTACCTGAAGGAAGCGATGAACGAGCGCGCCAGTC
AGCTGGCCCTGGTCGACAATGTGCCGACCGTGCGTCCCGGCTCGGACGGCCATACCTACCAGGACCGTACCGGCGGTACC
GAGGCCAGCGCCTTCTACATCGACGACAAGATCGATGTCGGCAACTGGACCATCACCCCCGGCATCCGCTTCGAGAAGAT
CGACAGCGACTGGCGCGACCGCCCGGTGCTCGGCCTGAACGGCAAGCCGGTGCAGGAGAAGAAGCGCAGCAAGGACTACA
ACGAACCGCTGCCGGCGCTGAGCCTGATGTATCATTTGAGCGACGAGTGGAAGCTGTTCGCCAACTACTCCGAATCGTTC
GGCAGCCTGCAGTACTTCCAGCTCGGCCAGGGCGGCAGCGGCAACGATACCGCCGCCGGCCTGGAGCCGGAGAAGGCCAA
GACCTACGAACTGGGCACGCGCTACGACAACGGCAGCTGGGGCGGCGAGATCACGCTGTTCTACATCGACTTCGACGACG
AGCTGCAGTACGTCAGCAACGACGTCGGCTGGACCAACCTCGGCGCCACCAAGCACCAGGGCATCGAGACTTCCGGCCAC
TATGACTTCGCCGCTCTCGATCCGCGCCTGGACGGCCTGTCGGTCTACGGCAGCCTCACCTATACCCGCGCCACCTACGA
AGGCGACATTCCCTCCTTCAAGGGGCGCGACCTGCCGCTCTACTCGCGCCAGGTGGCCACCGCCGGGGTGCGCTACGAGG
TCGACCGCTGGACCTACAACCTCGACGCCTTCGCCCAGTCCATGCAGCGCGCGCCAGGGCTGAGCACCGACAGCCAGGGC
AACTTCACCCACAACTACATCACCGAGCCCAGCGCCGACGGCCAGTACGGCGACATTCCCGGCTACGTGACCTGGAATGC
CCGCGTCGGCTACGACTTCGGCCCGCAGGCGTCGAACCTGAAGCTCGGACTCGGGGTGAAGAACCTGTTCGACAAGCAGT
ATTTCACCCGCTCCAGCGACAACAATTCGGGAATCTACGTGGGTCAGCCGCGAACGCTGTTCATGCAGGCCAGCGTCGGT
TTCTGA

Protein sequence :
MSSVSSLSRLAVAIALGVSMQAAQAEEEAKELGTVTVVGDWLGEADQAVVQNHPGARSVVRRREMLESGAQNVRDVLRKV
PGVQVQDNNGTGGSDISLNVGVRGLTSRLSPRSTVMIDGVPAAVAPYGQPQLSMMPLSIGNLESIDVVRGAGSVRYGPQN
VGGVINFVTRAIPEKFSGEIGTTIEHAGHGGWKKLNQAFLGGTADNGLGVALLYSGVKGADYRDGNNDNDIDDVLLKTHW
QLTDSDQLAANFHYYDAYADMPGGLTQAQYDDDPFQSVRDWDNFRGRRKDFSLKYTRQVDDLTQFEVLTYYSDSFRGSSI
AARNLRTITSYPRDYHVFAVEPRVSRIFFAGPTTQEIGIGYRYLKEAMNERASQLALVDNVPTVRPGSDGHTYQDRTGGT
EASAFYIDDKIDVGNWTITPGIRFEKIDSDWRDRPVLGLNGKPVQEKKRSKDYNEPLPALSLMYHLSDEWKLFANYSESF
GSLQYFQLGQGGSGNDTAAGLEPEKAKTYELGTRYDNGSWGGEITLFYIDFDDELQYVSNDVGWTNLGATKHQGIETSGH
YDFAALDPRLDGLSVYGSLTYTRATYEGDIPSFKGRDLPLYSRQVATAGVRYEVDRWTYNLDAFAQSMQRAPGLSTDSQG
NFTHNYITEPSADGQYGDIPGYVTWNARVGYDFGPQASNLKLGLGVKNLFDKQYFTRSSDNNSGIYVGQPRTLFMQASVG
F

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecA AAL08456.2 FecA Not tested SRL Protein 1e-135 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PLES_17991 YP_002439403.1 putative TonB-dependent receptor VFG1047 Protein 8e-136 45