Gene Information

Name : rnhA (PLES_35121)
Accession : YP_002441098.1
Strain : Pseudomonas aeruginosa LESB58
Genome accession: NC_011770
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : -
Position : 3894677 - 3895123 bp
Length : 447 bp
Strand : -
Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids

DNA sequence :
ATGACAGATAAAGAACAGGTAGTGATCTATACCGACGGCGCCTGCAAGGGCAACCCTGGGCGCGGCGGCTGGGGGGCGTT
GCTCCTCTACAAGGGCGCCGAGCGAGAGCTTTGGGGCGGCGAGCCGGACACCACCAACAACCGCATGGAACTGATGGCGG
CGATCCAGGCGCTGGCGGCACTCAAGCGTTCCTGTCCGATCCGTCTGATCACCGACTCGGAATACGTGATGCGCGGCATC
ACCGAATGGTTGCCGAACTGGAAGAAGCGCGGCTGGAAGACCGCCAGCAAGCAGCCGGTCAAGAATGCCGACCTCTGGCA
GGCCCTGGATGAGCAGGTCGCCCGGCACCAGGTGGAGTGGCAGTGGGTCCGCGGGCATACCGGCGATCCCGGCAACGAGC
GGGCCGACCAGTTGGCCAACCGTGGCGTCGCCGAATTGCCGCGCTGA

Protein sequence :
MTDKEQVVIYTDGACKGNPGRGGWGALLLYKGAERELWGGEPDTTNNRMELMAAIQALAALKRSCPIRLITDSEYVMRGI
TEWLPNWKKRGWKTASKQPVKNADLWQALDEQVARHQVEWQWVRGHTGDPGNERADQLANRGVAELPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 2e-36 58