Gene Information

Name : PLES_36651 (PLES_36651)
Accession : YP_002441250.1
Strain : Pseudomonas aeruginosa LESB58
Genome accession: NC_011770
Putative virulence/resistance : Virulence
Product : putative ClpA/B-type protease
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 4054803 - 4057436 bp
Length : 2634 bp
Strand : -
Note : -

DNA sequence :
ATGAGCATGATCAACGTAGACCTGCAACAACTGATTCAGGCGCTGGATGCCGACACCCGGCGCGACCTCGAAGGCTCGGC
CGAGCGCTGCGTAGCCCGTGGCGGCAGCAAGGTACTGGTGGAGGACCTGTTGCTGGGCCTGCTGGAGCGTCCCCAGGGAC
TGCTGGCGCGCGCCCTGCAGGATGCCGCGGTGGACGCCGGCGAACTCAACGCCGCGTTGCAAGCGCGGGGCGAGCACAGC
GCCTCGCGCAATCCGGTGTTCGCGCCCGAGCTGGTGCAGTGGCTGCAGGATGCGCTGTTGCTGGCCAACCTCGAACTGGG
CCGTAGCCAGATCGACCAGGCGGCATTGATCCTGGCCCTGCTACGCAACCCGTTGCGCTATGCCGGCAGCCGCTACCAGC
CGCTGCTGGCGCGGCTCGACATCGAGCGGTTGAAGGATTTCGCGCTCTCGCAGCCGCTGGAGGGCGCGCCCAGCGGCAAG
CCGGGCGGCGGCGAGTCCCTGTTGCAGCGTTTCACCCACAACCTTACCCAGCAGGCGCGCGACGGCAAGCTCGATCCGGT
GCTCTGTCGCGACGGGGCTATTCGCCAGATGGTCGACATCCTGGCCCGTCGGCGGAAAAACAACCCCATCGTGGTCGGCG
AGGCCGGCGTCGGCAAGACCGCCATCGTCGAAGGCCTGGCCTCGCGGATCGCCGCAGGGGAAGTGCCGCCGGCGCTGAGG
GACGTCGAGCTGTTGTCCCTCGACATGGGCCTGTTGCAGGCCGGTGCCAGCGTGAAGGGCGAGTTCGAGCGGCGCCTGAA
AGGCGTCATCGACGAAGTGAAGGCAGCGCTCAGGCCGACCATCCTGTTCATCGACGAGGCCCATACGCTGATCGGCGCGG
GCGGTCAGGCCGGCGGCTCGGATGCCGCCAACCTGCTCAAGCCGGCCCTGGCACGTGGCGAGTTGCGCACCATCGCGGCG
ACGACCTGGGCCGAATACAAGAAGTATTTCGAGAAGGACCCGGCGCTGGCCCGGCGCTTCCAGCCCGTGCAGTTGCATGA
GCCGAGCGTTGCCGAGGCGGTGACGATCCTGCGTGGCCTGGCCCGGGTTTACGAGGAAAGCCACGGTATCTACCTGCGCG
ACGACGCGGTGGTGGCCGCCGCCGAACTGTCCGCCCGCTACCTGGCGGGTCGCCAGTTGCCGGACAAGGCCGTCGACGTC
CTCGACACCGCCTGTGCGCGGGTGCGCATCAGCCTGGCGGCGGCGCCGGAGAGTCTCGAGCGCCTGCGCGGCGAGCTGGC
CGAAGGCGAGCGCCAGCGCCAGGCCCTGCGCCGCGATGCCGAGGCAGGCCTGCCGATCGACCACGATACCCTGCAGGCGC
TGGAGGAGCGCCTGGCCCAGGCGGAAAGCGAGCGGCACGTACAGGAGGACCAGTGGAGCCGCCAGCGCGAACTCGCCGAG
CGCCTGCTCGCCCTGCGCCAGCAATTGGCCAGGGCCCGCGAGGCGAACCGGGAAGAGCAGGGCGGCGAGGCGGACGCGGA
GACTTTCCCGGCCGACGAGCATGGCGGTGTCGAAGCCCTGGAAAAGGCCCTTCACGAAACCCGCCAGGCGCTCGCCGATG
CCCAGGCCCAGGGGCGGCTGGTCAGCTTCGAGGTCTGCCCGCGCCTGGTTGCCGAGGTGATCGGCGCCTGGACCGGCGTA
CCGGTGGAACAACTGGCGCGGGAACACAACGCCAAGGTGATGGGGTTCGCCGACGACCTGCGGGCGCGGATCCGTGGCCA
GGAACAGGCGGTCAGCGCCCTGGACCGCGCGATGCGCGCCACCGCGGCCGGGCTGAACAAGCCCGATGCGCCGGTCGGCG
TGTTCCTGCTGGTGGGCCCGAGCGGGGTGGGCAAGACCGAGACCGCGCTGGCGCTGGCCGACCTGCTGTATGGCGGCGAG
CGTTTCATCACCACCATCAACATGTCCGAGTTCCAGGAGAAGCACACCGTCTCGCGCCTGATCGGCGCGCCGCCCGGCTA
TGTCGGCTATGGCGAGGGTGGCATGCTCACCGAGGCGGTACGCCAGAAGCCCTATTCGGTGATATTGCTGGACGAGGTGG
AGAAGGCCGATCCGGACGTGCTCAACCTGTTCTACCAGATCTTCGACAAGGGCGTGGCCAACGATGGCGAAGGGCGCGAG
ATCGATTTCCGCAATACCTTGATCCTGATGACCTCCAACCTCGCCAGCGAGCACATCGCCGCGCTTTGCCAGGACGGCGC
GCGGCCTTCCGCCGAACTCCTGGAGGAAACCATCCGGCCGGCGCTCAGCCGGCATTTCAAGCCGGCGCTGCTGGCGCGCA
TGCGCGTGGTGCCTTACTACCCGGTGGGCGGCCCGGTACTGCGCGAGCTGATCGAGATCAAGCTGCAACGCCTCGGCGAG
CGCCTGGCGCGCCGTCAACTGGCTTTCGACTACAGCCAGGCGCTGGTGGGCCACCTGGCCGAGCGTTGCACCCAGAGCGA
CAGCGGCGCACGGTTGATCGACCACCTGCTGGACACGCACCTGCTGCCGCTGGTGGCCGACCGTTTGCTGGAAGCGATGG
CGCGCGACGAGCGTCTCGAGCGGGTCCATGCGACGCTGGGCGAGCACGGCCGCGTGCTCTGCGAGTTCGCCTGA

Protein sequence :
MSMINVDLQQLIQALDADTRRDLEGSAERCVARGGSKVLVEDLLLGLLERPQGLLARALQDAAVDAGELNAALQARGEHS
ASRNPVFAPELVQWLQDALLLANLELGRSQIDQAALILALLRNPLRYAGSRYQPLLARLDIERLKDFALSQPLEGAPSGK
PGGGESLLQRFTHNLTQQARDGKLDPVLCRDGAIRQMVDILARRRKNNPIVVGEAGVGKTAIVEGLASRIAAGEVPPALR
DVELLSLDMGLLQAGASVKGEFERRLKGVIDEVKAALRPTILFIDEAHTLIGAGGQAGGSDAANLLKPALARGELRTIAA
TTWAEYKKYFEKDPALARRFQPVQLHEPSVAEAVTILRGLARVYEESHGIYLRDDAVVAAAELSARYLAGRQLPDKAVDV
LDTACARVRISLAAAPESLERLRGELAEGERQRQALRRDAEAGLPIDHDTLQALEERLAQAESERHVQEDQWSRQRELAE
RLLALRQQLARAREANREEQGGEADAETFPADEHGGVEALEKALHETRQALADAQAQGRLVSFEVCPRLVAEVIGAWTGV
PVEQLAREHNAKVMGFADDLRARIRGQEQAVSALDRAMRATAAGLNKPDAPVGVFLLVGPSGVGKTETALALADLLYGGE
RFITTINMSEFQEKHTVSRLIGAPPGYVGYGEGGMLTEAVRQKPYSVILLDEVEKADPDVLNLFYQIFDKGVANDGEGRE
IDFRNTLILMTSNLASEHIAALCQDGARPSAELLEETIRPALSRHFKPALLARMRVVPYYPVGGPVLRELIEIKLQRLGE
RLARRQLAFDYSQALVGHLAERCTQSDSGARLIDHLLDTHLLPLVADRLLEAMARDERLERVHATLGEHGRVLCEFA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 7e-146 46
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 5e-146 46
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 1e-121 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PLES_36651 YP_002441250.1 putative ClpA/B-type protease VFG2076 Protein 1e-148 51
PLES_36651 YP_002441250.1 putative ClpA/B-type protease VFG2084 Protein 3e-144 48