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Name : PLES_52821 (PLES_52821) Accession : YP_002442860.1 Strain : Pseudomonas aeruginosa LESB58 Genome accession: NC_011770 Putative virulence/resistance : Virulence Product : RNA polymerase sigma factor Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 5822957 - 5823493 bp Length : 537 bp Strand : - Note : Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate DNA sequence : ATGAATGCGCCGAGTTCCTGCCTGTCCGCGGACCGCGACGGCGTCGCCACGCTCTACCGTGAAAACCATGCCTGGCTGCG CAACTGGCTGGCCTACCGACTCCGCTCCTGGGGACGCGGCGTGGCCGACGACCTGGCCCATGACACCTTCCTGCGCATTC TCGCCAGCCGCGACGGCGGCCAGCGTGAAGCGATCCGTCAGCCGCGCGCCTATCTCACCCGTATCGCCAACTGCGTGCTG GTCAGTTGGCGCCGTCGCCAATCGCTGGAACTTGCCTGGCTGGAGGCCCTGGCCACGCTGCCCGAGCCGTTGCAGCCGTC GCCGGAACAACAGAGCGTGATCGTCGAGACCCTGCACGAGATCGACGCGCTGCTCGATACCCTGCGCCCGCGGGTGAAAC AGGCATTCCTGATGGCGACGCTGGACGGCATGAAGCAGAAGGACATCGCCCAGGCGCTGGGCGTCGCGCTGCCGACGGTG AAGAAGTTCATCCACCAGGCCTACGTGACCTGCCTGAGCCTGATGCCCGATGAATGA Protein sequence : MNAPSSCLSADRDGVATLYRENHAWLRNWLAYRLRSWGRGVADDLAHDTFLRILASRDGGQREAIRQPRAYLTRIANCVL VSWRRRQSLELAWLEALATLPEPLQPSPEQQSVIVETLHEIDALLDTLRPRVKQAFLMATLDGMKQKDIAQALGVALPTV KKFIHQAYVTCLSLMPDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL08458.1 | FecI | Virulence | SRL | Protein | 9e-19 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PLES_52821 | YP_002442860.1 | RNA polymerase sigma factor | VFG1049 | Protein | 4e-19 | 43 |
