Gene Information

Name : Dhaf_2814 (Dhaf_2814)
Accession : YP_002459274.1
Strain : Desulfitobacterium hafniense DCB-2
Genome accession: NC_011830
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 3020837 - 3023431 bp
Length : 2595 bp
Strand : -
Note : KEGG: rca:Rcas_0920 ATPase; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA; Clp domain protein; Torsin; ATPase AAA; ATPase AAA-2 domain protein; SMART: ATPase AAA

DNA sequence :
ATGTCTTTTGATACGAACCGCTTTACCCAAAAATCTCAGGAGGCCATTATTCAAACGCAAACGATGGCGGAGCGTAATGG
CAACAGCCAAGTGGAGCCTGAGCACTTGCTTTTAGCTCTCCTGGAACAGGGAGAGGGGGTCGTTCCCCAAGTCCTGACCA
AGCTTGATATCCCGGTGGGGGCTTTGGTTCAAAAAGTACGCCAGGAGGTCAACCGCCTCCCGCGCATGATGGGAGCTAAT
GTTCAACTGACCATTTCCCCCCGGCTGCGGACCGTGCTGGTCTCGGCTCACGATGAGATGGAGACCTTTAAGGATGACTA
TGTAAGCACCGAACATCTTTTGCTGGCGATCCTCAGCCAAGGCGGGGGCCCAGCGGAGAAAATCTTAAAGCAAGAGGGTC
TGAATCGCGAGAAGCTTCTGCAGGCTTTGCGTGTGGTGAGAGGGACTCAGCGGGTGACGAGCCAGACACCGGAAGGAACC
TTCCGGGCCCTTGAACAATATGGACGCAATCTTGTCGAACAAGCCCGCCGGGGAAAGCTGGATCCGGTCATCGGCCGGGA
CGAAGAAATTCGCCGCGTCATTCAGATTCTTTCCCGCAAGACCAAGAACAACCCTGTTCTCATCGGAGAGCCCGGTGTGG
GAAAAACGGCCATTGTCGAAGGTCTGGCCCAGCGGATCGTCCGCGGTGATGTTCCCGAATCGGTGAAAGATAAGAAGATC
ATTGCCTTGGATATGGGTTCCTTGATCGCCGGAGCGAAATACCGGGGAGAATTTGAGGAACGGCTTAAAGCGGTGCTTAA
GGAAGTTCAGGAACGGGAAGATATTATCCTGTTTATCGATGAACTGCACACGGTGGTGGGAGCAGGGGCAGCAGAAGGGG
CCATGGATGCCGGCAATATGCTTAAACCCATGCTGGCCCGGGGTGAGCTGCATATGGTGGGAGCCACAACCCTGGATGAA
TACCGCAAGTATATTGAAAAGGATGCCGCTCTGGAACGGCGCTTTCAGCCGGTTACGGTGGGAGCTCCCAGTGTTGAGGA
TACCATCTCCATTTTGCGGGGGCTCAAAGAACGCTATGAAACCCATCATGGCGTAAGAATTACCGATGGAGCGATTATCG
CCGCCGCAGTTCTTTCTGACCGCTATATCAGCGATCGTTTCCTGCCGGATAAAGCCATCGACCTCATTGATGAGGCCGCT
GCCCGCATGCGTATGGAGATCACCAGTGACCCCTATGAATTGGATCAGATCAAGCGCCGGATTCTGCAGTTGGAGATTGA
GCGGGAGGCCTTAAAGAAGGAAAAAGACGAAGGCAGCAAGGAACGCCTGGAAAAGATTGAGGAAGATCTGGCTAACCTCA
AAGAAGAACGCAGTGCCCTGGAAGCCCAGCTGCAAGGGGAAAGAGAAGTTCTGACCAGAATCAACTCCCTCAAGGAAGAC
ATCGATCAGAACCGCCTTAAGATGGAACAAGCCCAGCAGGCCTTTGATTATAACAAGGCGGCCGAGCTGCAATATGGCAT
ATTGCCAAAGCTGGAGAAGGAGCTCAACGCTTTGGAAGAGCAGCTTCGCAACCGGAAGAACACCTTGCTCAAGCAGGAAG
TAGGGGAAGAGGACATTGCTGAAGTAGTGGCCAAATGGACCCAGGTTCCTGTTGCTAAACTTTTGGAAAGCGAAATGGAT
AAACTGGTCCATATGGAAGCGCGCATCCATCAGCGGGTGATCGGGCAGGAGGAGGCTGTGAAAGCGGTAGCCGATGCTGT
CCGCAGATCCCGGGCCGGCCTGCAGGACCCCAACCGGCCCTTAGGTTCGTTCCTGTTTCTCGGCCCCACAGGGGTAGGGA
AGACGGAGTTGGCCAAAGCCTTGGCTGAATTTCTCTTTGATGATGACCAGGGGATCGTGCGCATCGACATGTCCGAATAT
ATGGAGAAGCATACCGTTTCCCGCCTGATCGGCGCTCCTCCGGGGTACGTAGGCTATGAAGAGGGAGGCCAGCTCACGGA
AGCAGTAAGGCGCAAACCCTATAGTGTGGTCCTCTTTGATGAAGTGGAAAAAGCTCATGGGGATGTCTTTAATGTGTTGC
TGCAGCTCCTCGATGACGGCCGCTTAACCGACGGGCAGGGACGGGTGGTTAATTTTAAGAATACAGTGGTCATTCTGACC
AGTAATATCGCCAGCCCCTTGATTCAGGAATTGACGGCCTCAGGAGCGGCCCAGGAAGTGTTGCGTTCCCGGGTTACCGA
GGAACTCAGGCTGCATTTCCGGCCGGAGTTTTTGAACCGGTTGGATGAAATCATCGTTTTCCACCCTCTTGGTCAGGAGC
ATATTGGTTCCATCGTGCAGATACAGATCAACAAGCTGCGTGATTATCTGGCTCCCCGCAAAATGACTCTGGAGCTCTCC
CAGGGAGCCTTAAATAAAATCATTCAACAAGGTTATGATCCGATCTATGGAGCAAGACCCCTGAAAAGGGTGATCCAGCA
AAACCTCCAAAATCCTTTGGCCATGAAAATCCTGCAGGGAATCCTTCACGAAGGGGATCATGTCCTGGTCGACCTTGATC
CTCAGGGCCAGCTTCTGTTTAAAAAGTCGGAATAA

Protein sequence :
MSFDTNRFTQKSQEAIIQTQTMAERNGNSQVEPEHLLLALLEQGEGVVPQVLTKLDIPVGALVQKVRQEVNRLPRMMGAN
VQLTISPRLRTVLVSAHDEMETFKDDYVSTEHLLLAILSQGGGPAEKILKQEGLNREKLLQALRVVRGTQRVTSQTPEGT
FRALEQYGRNLVEQARRGKLDPVIGRDEEIRRVIQILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRGDVPESVKDKKI
IALDMGSLIAGAKYRGEFEERLKAVLKEVQEREDIILFIDELHTVVGAGAAEGAMDAGNMLKPMLARGELHMVGATTLDE
YRKYIEKDAALERRFQPVTVGAPSVEDTISILRGLKERYETHHGVRITDGAIIAAAVLSDRYISDRFLPDKAIDLIDEAA
ARMRMEITSDPYELDQIKRRILQLEIEREALKKEKDEGSKERLEKIEEDLANLKEERSALEAQLQGEREVLTRINSLKED
IDQNRLKMEQAQQAFDYNKAAELQYGILPKLEKELNALEEQLRNRKNTLLKQEVGEEDIAEVVAKWTQVPVAKLLESEMD
KLVHMEARIHQRVIGQEEAVKAVADAVRRSRAGLQDPNRPLGSFLFLGPTGVGKTELAKALAEFLFDDDQGIVRIDMSEY
MEKHTVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEVEKAHGDVFNVLLQLLDDGRLTDGQGRVVNFKNTVVILT
SNIASPLIQELTASGAAQEVLRSRVTEELRLHFRPEFLNRLDEIIVFHPLGQEHIGSIVQIQINKLRDYLAPRKMTLELS
QGALNKIIQQGYDPIYGARPLKRVIQQNLQNPLAMKILQGILHEGDHVLVDLDPQGQLLFKKSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 3e-104 42
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 2e-104 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dhaf_2814 YP_002459274.1 ATP-dependent chaperone ClpB VFG2076 Protein 4e-121 43
Dhaf_2814 YP_002459274.1 ATP-dependent chaperone ClpB VFG2084 Protein 5e-110 41