Gene Information

Name : CKR_2015 (CKR_2015)
Accession : YP_002472480.1
Strain : Clostridium kluyveri NBRC 12016
Genome accession: NC_011837
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2274362 - 2275081 bp
Length : 720 bp
Strand : +
Note : homology (Evalue<1e-4) to COG1136 [R] ABC-type transport systems, involved in lipoprotein release, ATPase components

DNA sequence : 
ATGGAATGGGAGGAAAATAAAATGTTCATGCAGGTTAATAATTTAAAGAAAAGCTATAAAACAGGTAATATAGTTACTCC
TGTCTTAGACAATGTAAATTTGTCTCTCGACAATGGGGAAATTGGTGCAATTCTTGGTCCTTCAGGCTCCGGCAAATCCA
CTCTGCTCAATATAATAGGCGGACTGGATTTTTGTGATCATGGATCAGTTATAGTAGATAACACAGAAGTCACCAAACTT
TCGGATAAAAGGCTTACTGAATATAGAAGAAAGAAAATAGGATTTATATTTCAGTTTTATAATCTTATACCCCACCTCAC
TGTAGGTGAAAATATTGAAGTTGTTTCAAATATAAGCAAACATCCATTGTCCACAGATGAGATATTAAAGGATGTAGATA
TGCTTGATAAAAAATACAGATTCCCAAATGAACTCAGCGGAGGTGAGCAGCAGAGAACTGCAATTGCAAGAGCTATAGTT
AAAAATCCATCCCTTCTTTTATGTGACGAGCCTACAGGAGCACTGGACTTTTTAACTTCAAGGGAAATATTGAAACTGCT
GCAGAAAATCAACAGAAATTTTAGTACAACTATACTCATGATAACCCACAATGAAGCTATAAGTTCCATGGCCCATAGAA
TCTATAAAGTGAGAAGTGGAAAAATTTTAGAAAACAAAATAAATAAAAATATAATTCCTGCAGAAAGGATTGAATGGTAA

Protein sequence : 
MEWEENKMFMQVNNLKKSYKTGNIVTPVLDNVNLSLDNGEIGAILGPSGSGKSTLLNIIGGLDFCDHGSVIVDNTEVTKL
SDKRLTEYRRKKIGFIFQFYNLIPHLTVGENIEVVSNISKHPLSTDEILKDVDMLDKKYRFPNELSGGEQQRTAIARAIV
KNPSLLLCDEPTGALDFLTSREILKLLQKINRNFSTTILMITHNEAISSMAHRIYKVRSGKILENKINKNIIPAERIEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-27 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-32 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-32 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKR_2015 YP_002472480.1 hypothetical protein CP001581.1.gene598.p Protein 1e-38 44
CKR_2015 YP_002472480.1 hypothetical protein NC_012469.1.7685735. Protein 8e-46 43
CKR_2015 YP_002472480.1 hypothetical protein NC_012469.1.7686878. Protein 3e-35 42
CKR_2015 YP_002472480.1 hypothetical protein CP001581.1.gene798.p Protein 6e-39 41