Gene Information

Name : cobT (CKR_2578)
Accession : YP_002473043.1
Strain : Clostridium kluyveri NBRC 12016
Genome accession: NC_011837
Putative virulence/resistance : Unknown
Product : nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG2038
EC number : -
Position : 2900124 - 2901206 bp
Length : 1083 bp
Strand : -
Note : catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole

DNA sequence :
ATGAGTCTGATTGAAAATACTCTAAACAAAATAGAAAAAAGAAATGAAAAAGCTATGAAAAATGCTAAAGAAAGATTAGA
TAATCTGGCAAAACCTATAGGAAGTCTTGGAGAATTAGAAGAAATAGCTGTAAAAATGGCTGGAATTACAGGAAAAGTAC
ATAATAAAATACACAAAAAAAATATAGTTATAATGTGTTCAGATAATGGAATATGGGAAGAAGGTATAAGCAATTGTCCA
AAAGGATTGACAGCAAATATTACTGAAAATTTTGTTAAAGGTATAACAGGAGTATGTGTATTGGGCGATTTTTTCAAATG
TGACAGAACCATAGTGGATATAGGAACTGATTATGATTTCAAAAGTGATGAAATCATAAATAAAAAAATAGATTATGGTA
CTAGAAATATAGCAAAAGGACCGGCTATGACCAGAGAACAGTGTATAAAAGCAATTGAAACGGGAATAGAAATAATAGAT
GGACTTGTAAAAGAAGGATATGATTTATTTGGAACAGGAGAAATGGGAGTATGTAATACGGCCACAAGTTCTGCGGTTTT
AAGTGCTATATTAAAATTGCCAGTAAATGAAACTGTGGGAAAAGGTTCTGGAATTACAGAAGATAAATTCAAGGCTAAGA
AGAAAGCAGTTCAAAATGCCATTAAAATAAATAATCCAAATCCAGAAGATATTATTGATGTTATAGCAAAGGTAGGAGGA
TTTGATATAGCAGGAATATGTGGATGCTTTTTAGGGGCTGCTAAAAATAGAGTGCCTATTGTAATAGATGGTTTTATATC
TTCTGTAGCAGCACTTTGTGCTGTAAAATTAAATGAAAAGGTAGTAGATTTTTTATTTCCTTCGCATCTTTCAGCAGAAC
CGGCGGCTAAATGTGTAATGAAAGAGTTAGGATTGAATCCTATGTTAAATTTAAATATGAGATTAGGAGAAGGATCAGGA
TGTCCTATGGCTTTTGCAATATTAGAATCTGCTCTATATGTTATGGATAATATGGGGACTTTTGAAGAAGCAGAGGTAGA
TGGCAGTAAACTTATAGATATTAGAAAATCAAGTGATTCTTAG

Protein sequence :
MSLIENTLNKIEKRNEKAMKNAKERLDNLAKPIGSLGELEEIAVKMAGITGKVHNKIHKKNIVIMCSDNGIWEEGISNCP
KGLTANITENFVKGITGVCVLGDFFKCDRTIVDIGTDYDFKSDEIINKKIDYGTRNIAKGPAMTREQCIKAIETGIEIID
GLVKEGYDLFGTGEMGVCNTATSSAVLSAILKLPVNETVGKGSGITEDKFKAKKKAVQNAIKINNPNPEDIIDVIAKVGG
FDIAGICGCFLGAAKNRVPIVIDGFISSVAALCAVKLNEKVVDFLFPSHLSAEPAAKCVMKELGLNPMLNLNMRLGEGSG
CPMAFAILESALYVMDNMGTFEEAEVDGSKLIDIRKSSDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cobT YP_853092.1 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Not tested PAI IV APEC-O1 Protein 2e-59 41