Name : cobT (CKR_2578) Accession : YP_002473043.1 Strain : Clostridium kluyveri NBRC 12016 Genome accession: NC_011837 Putative virulence/resistance : Unknown Product : nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG2038 EC number : - Position : 2900124 - 2901206 bp Length : 1083 bp Strand : - Note : catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole DNA sequence : ATGAGTCTGATTGAAAATACTCTAAACAAAATAGAAAAAAGAAATGAAAAAGCTATGAAAAATGCTAAAGAAAGATTAGA TAATCTGGCAAAACCTATAGGAAGTCTTGGAGAATTAGAAGAAATAGCTGTAAAAATGGCTGGAATTACAGGAAAAGTAC ATAATAAAATACACAAAAAAAATATAGTTATAATGTGTTCAGATAATGGAATATGGGAAGAAGGTATAAGCAATTGTCCA AAAGGATTGACAGCAAATATTACTGAAAATTTTGTTAAAGGTATAACAGGAGTATGTGTATTGGGCGATTTTTTCAAATG TGACAGAACCATAGTGGATATAGGAACTGATTATGATTTCAAAAGTGATGAAATCATAAATAAAAAAATAGATTATGGTA CTAGAAATATAGCAAAAGGACCGGCTATGACCAGAGAACAGTGTATAAAAGCAATTGAAACGGGAATAGAAATAATAGAT GGACTTGTAAAAGAAGGATATGATTTATTTGGAACAGGAGAAATGGGAGTATGTAATACGGCCACAAGTTCTGCGGTTTT AAGTGCTATATTAAAATTGCCAGTAAATGAAACTGTGGGAAAAGGTTCTGGAATTACAGAAGATAAATTCAAGGCTAAGA AGAAAGCAGTTCAAAATGCCATTAAAATAAATAATCCAAATCCAGAAGATATTATTGATGTTATAGCAAAGGTAGGAGGA TTTGATATAGCAGGAATATGTGGATGCTTTTTAGGGGCTGCTAAAAATAGAGTGCCTATTGTAATAGATGGTTTTATATC TTCTGTAGCAGCACTTTGTGCTGTAAAATTAAATGAAAAGGTAGTAGATTTTTTATTTCCTTCGCATCTTTCAGCAGAAC CGGCGGCTAAATGTGTAATGAAAGAGTTAGGATTGAATCCTATGTTAAATTTAAATATGAGATTAGGAGAAGGATCAGGA TGTCCTATGGCTTTTGCAATATTAGAATCTGCTCTATATGTTATGGATAATATGGGGACTTTTGAAGAAGCAGAGGTAGA TGGCAGTAAACTTATAGATATTAGAAAATCAAGTGATTCTTAG Protein sequence : MSLIENTLNKIEKRNEKAMKNAKERLDNLAKPIGSLGELEEIAVKMAGITGKVHNKIHKKNIVIMCSDNGIWEEGISNCP KGLTANITENFVKGITGVCVLGDFFKCDRTIVDIGTDYDFKSDEIINKKIDYGTRNIAKGPAMTREQCIKAIETGIEIID GLVKEGYDLFGTGEMGVCNTATSSAVLSAILKLPVNETVGKGSGITEDKFKAKKKAVQNAIKINNPNPEDIIDVIAKVGG FDIAGICGCFLGAAKNRVPIVIDGFISSVAALCAVKLNEKVVDFLFPSHLSAEPAAKCVMKELGLNPMLNLNMRLGEGSG CPMAFAILESALYVMDNMGTFEEAEVDGSKLIDIRKSSDS |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
cobT | YP_853092.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | Not tested | PAI IV APEC-O1 | Protein | 2e-59 | 41 |