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Name : nfrE (HAPS_1123) Accession : YP_002475684.1 Strain : Haemophilus parasuis SH0165 Genome accession: NC_011852 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 1113925 - 1115826 bp Length : 1902 bp Strand : + Note : COG:O;COG1138 DNA sequence : ATGCTTCCCGAACTGGGTTATTTCTGTTTAGTCTTATTAGCTGGTATTTCAGGGTTACAGGTTTTATGTTCCTTATGGGG AGAAATTCGCCATCAACCCTTTTGGTTGAGTGGAAATCGCCTATTTAGTTTAATTCAAGCCTTATTAGCCTTAGCCTGTT TTGGCTGTTTAGCCTACGGTTTTATCTATGATGATTTCAGCGTTGCCTATGTCGCTGCTCATTCTAATAGTCAATTACCC ACATTCTTCAAATTTGCAGCCACTTGGGGAGGACACGAAGGATCAATGCTGTTTTGGCTAACGGCATTGGCATTATGGAC AGGCATATTTTGCATTTTTTCAGGCAAAATCGACCGCTTGTTTACTTACCGTACCCTCGCCTCTCTCGCCTTAATTATTT TAGGCTTTGCTTTGTTTATTCTCTTGGTCTCTAACCCATTTGAGCGTAGTTTTCCCCCTTCACCAGAGGGGCAAGATCTT AATCCTATGTTACAAGATATCGGATTGATTTTTCACCCACCACTGCTTTATTTAGGCTATGTAGGCTTTGCTGTCACATT TGCAATGACAATGGCAATGTTGCTTGGTGGCGTGTTTGATTATGCTATTGCTCGTTGGATCCGCCCTTGGACAATGGTCG CTTGGGGATTTCTAACCGCAGGCATAATGTTAGGTGCTTGGTGGGCTTATTATGAACTTGGCTGGGGGGGCTGGTGGTTT TGGGATCCTGTTGAAAATGCCTCTTTAATGCCGTGGTTACTTGGTACTGCTCTGTTACATAGTTTAGTCGTTAGCGAACA GCGAGGCATTTTTAGTTATTGGACAATTTTATTAGCCATCTTTGCCTTTGCGTTAAGTCTGTTAGGCACATTTATTGTTC GTTCTGGGGTTCTTACTTCTGTTCACGCATTTGCAGTGGACGCAGAGCGAGGAATGGCTCTGCTTATTTTGTTCTTTAGC TTGAGCTTTGTTGCATTGACTCTATTCGCTTTACGAGTGAATTTATGGCAAGGCAATGTTCGTTTTCATCTGTTTTCAAA AGAAACGGCATTATTATTGGTTAATGGCTTATTTGCATTAGCAACGCTGGTGGTTATTCTTGGTACATTTTATCCGATGA TTTTCAGTGCGATGGGCTGGGGCTCGATTTCGGTCGGCGCGCCCTATTTCAATACGATTTTCACCCCCTTAGCATTGATT TTGTTATGCCTAATGGGATTTGCAATAGTGCTACGTTGGAAGCATATTCCACAACGTCAAATCTTGTGGCAACTGGCGTT ACTGCCCGTTGCGGTGTTGCTCAGTTTGGGCTTCAGTTATCAAGTTTTGCAACAGGTCTATGTACATCAATTACAGTGGC AACCCACTCTTTTTATCTCACTCGCGATTTGGGTTGTACTAACTCATCTACCTTATCAGCGATTTATGTGGCAAATCCGA CCGCTTGCAATGCGACTGGCTCATATTGGTTTTGCGATAAGTGTGATTGGGGCAATGATGAATAGCTATTATGCTGATGA AGTTGGCGTGAGACTAAAACCAACGCAGTCTGCTGAATTAGCAGGGCTACACTTTGAATATGTCAAACACCACAATGAAA TTGGGGTAAACTACACTGCCGAAGTAGCAGAGTTTCATCTTTATGATCAACATCATCAAAAATTGGCAACCTTGTTGCCC GAACGCCGTTACTATGATGTCCGTACAATGACAATGGCAGAAGTGGGGCTAGCCCATTATGGTTTAGATGATATTTATAT TGTGATGGGCGATAAGTTTGGTAATAAAGAGTACGCATTTCGTCTGCACTACAAACCTTATGTTCGTATTTTATGGCTAG GCGGTGCAATAATGGTCTTGGCGAGCCTATTGGCATTGGTTGGTTATCGGAGAAAAAAATGA Protein sequence : MLPELGYFCLVLLAGISGLQVLCSLWGEIRHQPFWLSGNRLFSLIQALLALACFGCLAYGFIYDDFSVAYVAAHSNSQLP TFFKFAATWGGHEGSMLFWLTALALWTGIFCIFSGKIDRLFTYRTLASLALIILGFALFILLVSNPFERSFPPSPEGQDL NPMLQDIGLIFHPPLLYLGYVGFAVTFAMTMAMLLGGVFDYAIARWIRPWTMVAWGFLTAGIMLGAWWAYYELGWGGWWF WDPVENASLMPWLLGTALLHSLVVSEQRGIFSYWTILLAIFAFALSLLGTFIVRSGVLTSVHAFAVDAERGMALLILFFS LSFVALTLFALRVNLWQGNVRFHLFSKETALLLVNGLFALATLVVILGTFYPMIFSAMGWGSISVGAPYFNTIFTPLALI LLCLMGFAIVLRWKHIPQRQILWQLALLPVAVLLSLGFSYQVLQQVYVHQLQWQPTLFISLAIWVVLTHLPYQRFMWQIR PLAMRLAHIGFAISVIGAMMNSYYADEVGVRLKPTQSAELAGLHFEYVKHHNEIGVNYTAEVAEFHLYDQHHQKLATLLP ERRYYDVRTMTMAEVGLAHYGLDDIYIVMGDKFGNKEYAFRLHYKPYVRILWLGGAIMVLASLLALVGYRRKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 6e-84 | 43 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 4e-87 | 42 |
