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Name : ccmF (HAPS_2210) Accession : YP_002476590.1 Strain : Haemophilus parasuis SH0165 Genome accession: NC_011852 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 2173353 - 2175293 bp Length : 1941 bp Strand : - Note : COG:O;COG1138 DNA sequence : ATGATTGCTGAATTAGGTAACTATACCCTTGCTCTTGCTCTCTCATTGGCAATTTTATTGGCGATCTTACCGCTTGTTGG CGCTCATAAACAAAATGCTAGTCTGATGGCATTGGCTCGTCCGATGACGTGGGCGGTTTTTTTAGCATTATCAATCTCGT TTGGCTCGCTTTTTTATCTGTTTGCGGTCAATGATTTTACTGTGCAGTATGTGGTGAATAACTCAAACAGTACGTTACCG TTAGAGTATCGCCTTTCTGCTGTTTGGGGTTCTCACGAAGGATCTTTGTTGCTTTGGATTTGGCTACTTTCCCTTTGGAG CGTTGCCGTTGCGACATTCAGCCGACAAATGCCTGAAGAAGCCATCGCTCGTGTATTGGGGGTAATGGGCTTGGTTAGCA TTGGCTTTTTAGTCTTTATTCTGTTTACTTCTAACCCGTTTAACCGAACTTTCCCTGATTTTCCTGTTGATGGTCGAGAG CTTAATCCGATGTTGCAAGATGTTGGCTTAATCTTCCACCCTCCGTTACTGTATATGGGCTATGTGGGCTTTTCTGTTGC CTTTGCTTTTGCTATTGCGTCGTTGATGACAGGTCGTCTTGATACTGCTTGGGCGAGATGGTCACGTCCTTGGACTATGG CAGCGTGGGTATTTTTAACATTAGGTATCGTACTCGGCTCTTGGTGGGCATACTACGAGCTTGGCTGGGGCGGTTGGTGG TTCTGGGATCCTGTGGAAAATGCCTCGTTAATGCCGTGGATTGCAGGTACGGCATTAATTCACTCTTTAGCGGTTACGGA AAAACGTAGTACTTTCAAAGCGTGGACGGTCTTGCTAGCTATTCTTGCTTTTTCACTCTGCTTACTCGGCACATTCTTAG TGCGTTCAGGGATTTTGGTATCGGTTCACGCTTTTGCTTCTGATCCAACTCGAGGCTTATATATTTTGGCTTATCTCGTG GTGGTTATTGGCGGTTCGCTACTGCTTTACGCTTATCAAGGCAGTAAAATCAAGAGCTTAGACAATTCCGAACGTTACTC ACGAGAGTCAATGTTATTACTCAATAATGTGCTATTAATGGCGTTCTTATCGGTGGTCTTTTTAGGCACGATTTTACCGT TAATTCATAAACAAATTGGTTTAGGGACAATTTCTATCGGGGCGCCTTTCTTCGATCAAATGTTTATGATCTTAATGGTG CCTTTTGCATTTTTATTGGGGATTGGACCGCTTGTAAAATGGCGTCGAGATCAGGTTTCTGCTATCCGTAAGCCAGTTCT CATTTCATTAGCCGTAATGATATTGCTTGGCTTTGGATTACCTTATCTTTTTGCCAGCAAAATTACTGTCAGCGTGGTAT TAGGGACAATGATGTCCGTCATTATCGTGGCATTGAGTTTATATGAACTACATCAACGAGCAACGCATCGTCATAGTTTC TTGCAAGGCATTTTGAAACTTTCTCGTTCCCATTGGGGAATGGTGTTGGCTCATTTAGGGGTTGCAATGACTGTGTTTGG TATTGCCTTTAGCCAAAATTACAGTATCGAAAAAGATGTACGAATGAATGTGGGCGACAAAGTTGAAATTTTAGATTACA ACTTTACCTTCAAGGGTATTCGTGACTCAAATGGGGCAAACTATATTGGTGGCACAGCGGATATTGAAATTCATCGAAAT GGTAAATATGAAGCCACACTACACGCAGAAAAACGCTTTTACAATGTCAGTAAAATGGGTATGACTGAAGCTGCGATTGA CTGGGGATTTAGTCGAGATCTCTATGCAGCCTTAGGTGAACGTTTAGAAGATGGCTCTTGGGGCGTACGTTTATACTACA AACCGTTTATCCGTTGGATTTGGTTCGGTGGTTTGTTTATGGCGATAGGTGGCATACTTTGTATGATGGATAGACGTTAT CGCTTAAAACAGAATAATTAA Protein sequence : MIAELGNYTLALALSLAILLAILPLVGAHKQNASLMALARPMTWAVFLALSISFGSLFYLFAVNDFTVQYVVNNSNSTLP LEYRLSAVWGSHEGSLLLWIWLLSLWSVAVATFSRQMPEEAIARVLGVMGLVSIGFLVFILFTSNPFNRTFPDFPVDGRE LNPMLQDVGLIFHPPLLYMGYVGFSVAFAFAIASLMTGRLDTAWARWSRPWTMAAWVFLTLGIVLGSWWAYYELGWGGWW FWDPVENASLMPWIAGTALIHSLAVTEKRSTFKAWTVLLAILAFSLCLLGTFLVRSGILVSVHAFASDPTRGLYILAYLV VVIGGSLLLYAYQGSKIKSLDNSERYSRESMLLLNNVLLMAFLSVVFLGTILPLIHKQIGLGTISIGAPFFDQMFMILMV PFAFLLGIGPLVKWRRDQVSAIRKPVLISLAVMILLGFGLPYLFASKITVSVVLGTMMSVIIVALSLYELHQRATHRHSF LQGILKLSRSHWGMVLAHLGVAMTVFGIAFSQNYSIEKDVRMNVGDKVEILDYNFTFKGIRDSNGANYIGGTADIEIHRN GKYEATLHAEKRFYNVSKMGMTEAAIDWGFSRDLYAALGERLEDGSWGVRLYYKPFIRWIWFGGLFMAIGGILCMMDRRY RLKQNN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 9e-156 | 63 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 1e-138 | 52 |
