Gene Information

Name : Cyan7425_4582 (Cyan7425_4582)
Accession : YP_002485251.1
Strain : Cyanothece sp. PCC 7425
Genome accession: NC_011884
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 4661671 - 4664370 bp
Length : 2700 bp
Strand : -
Note : KEGG: tel:tll2453 endopeptidase Clp ATP-binding chain B; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA central domain protein; Clp domain protein; Torsin; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMA

DNA sequence :
ATGCAGCCAACCGACCCAGCCAAGTTTACTGATAAGGCATGGGAAGCCATTGTTAAATCTCAAGATGTAGCCCGCCAGTT
TAAGAATCAACACCTGGAAGTCGAACACCTGGCCATTGCCCTGTTAGAACAGGAAGGCTTAGCGGGTGCAATTCTGGCCC
GGGTGGGAGCCGATCAAAATTTGATGCTCAAACGGTTGGCAGACTTCACTAAACAACAGCCCCGCGTGCCCGATACCAGT
CAGCTCTACCTGGGACGCTACCTGGATTTACTGCTGGATCAGGCGGAGGCAGCCCGGCAAACCCAGGGGGACGGTTTCAT
TTCTGTCGAACATCTGCTTTTGGCTCTGGCAGAAGACAAGCGGGTGGGACGCAACCTCTATCGCTCTATGGAGGTCGATC
GAGCCAAGCTGGAAAAAGCGATCTCTGATATTCGCGGTAGTCAGAAAGTTTCGGACCAGAACCCAGAAAATCGCTACGAT
GCCCTCAGTAAGTATGGGCGCGACTTAACGGAACAGGCCAGGGCGGGCAAGTTAGACCCGGTGATCGGTCGGGATGAAGA
AATCCGCCGGGTGGTGCAGGTTCTATCCAGACGCATGAAAAATAACCCTGTTCTGATTGGCGAACCGGGGGTGGGTAAAA
CGGCGATCGCTGAGGGGTTAGCGCAACGCATCATTAACAATGACGTCCCGGAATCGCTAAAAAACCGCCGCTTAATTTCC
CTCGATATGGGCAGCCTGATTGCCGGGGCCAAGTACCGGGGGGATTTTGAAGATCGGCTCAAGGCGGTCCTGCACGAAGT
TACCCATTCTGATGGCCAGATTGTCCTGTTTATCGATGAACTCCATACCGTGGTGGGAGCCGGGGCCGGTCAGGGCAACA
TGGATGCTGGCAACTTGCTCAAACCGATGCTGGCTCGGGGTGAACTGCGTTGTATTGGGGCCACCACACTGGATGAATAC
CGCAAGCACATTGAAAAGGATGCGGCCTTAGAACGGCGATTCCAGCAGGTTTATATTGGCCAGCCCAGTGTTGAGGATAC
GATCTCGATTCTGCGCGGCCTGAAGGATCGCTATGAAATTCACCACAATGTCAAAATCACCGATTCTGCTTTAGTGGCGG
CGGCAACCCTCTCTGATCGTTACATCAGCGATCGATTCTTACCCGATAAAGCGATCGACCTGGTGGATGAAGCGGCTGCC
AAACTGAAAATGGAAATGACCTCCAAACCAGCGGAACTGGAAGTGGTGGAACGGCGGCTGATGCAACTGGAGATGGAGCG
GTTGTCTCTGGAGCAAGAAGAAAATCGCACCAAAACCGGGATCTATGCGGCTGCCCGCGATCGCCTGCAACGAATTGAGC
AGGAAATTGCCGAACTGAGTCCAAAAAAAGATGAGATGGCCGCCCAGTGGAAATCTGAAAAGGATGTGCTGGAGCAGATC
AATACCCTCAAGGAAGAAGAAGACCGAGTCAAACTGCAAATTGAACAAGCAGAGCGGGATTACAACCTGAACAAAGCGGC
CCAACTGAAATACGGTCGATTGGAAACCCTGCAGCGGGAGTTAGAAGCAGCGGAAACCAAGTTAATTGATATCCAGGCCA
ATGGCAGTACCTTCCTGCGGGATCAGGTGACGGAAGCGGACATTGCCGAAGTCGTGGCTAAGTGGACGGGGATTCCGGTG
AATCGCTTGCTGGAGTCGGAACGGCAAAAACTGCTCCATCTGGAAACCCATCTGCACGAGCGGGTGGTCGGCCAGGAAGA
AGCGGTGGGAGCCTTAGCTGCGGCCATTCGTCGGGCCAGGGCCGGGATGAAAGATCCCAATCGCCCGATCGGTTCGTTCC
TGTTTATGGGGCCGACGGGGGTGGGCAAAACGGAACTGGCGCGGGCCCTGGCTCAATTTCTGTTTGACACGGAAGAAGCC
CTGGTGCGGGTGGATATGTCCGAGTACATGGAAAAAAATTCTGTGGCGCGGATGGTGGGGGCCCCTCCGGGCTATGTTGG
CTATGACGAAGGGGGGCAGTTGACGGAATCGATTCGGCGGCGGCCCTACTCTGTGGTGTTACTGGATGAAGTGGAAAAGG
CCCACCCGGATGTCTTTAATATGCTGCTGCAGGTGCTGGATGATGGCCACCTTACGGATGGTCAGGGCAGAACTGTAGAC
TTCCGCAATACCGTCATTGTCATGACCAGCAACATTGGCAGTGAACATATTCTTGATGTGGCTGGGGATGACTCCCGCTT
TGAAGAAATGCGTAAACGGGTAGAGCAGGCCCTGCGATCGCACTTTCGCCCCGAATTCCTCAACCGCGTTGATGACATTA
TTCTCTTCCATGCCCTCGATCGGGTCCAACTGCGTCAAATTGTTGAGATTCAGGTGCGGCGAGTGCAGAAATTAATGAGT
GATCAAAAGATCAAACTGGACTTTACCGCCGCCGCTTTAGATCACATTGTCGATGCCGGTTTTGACCCCGTCTATGGAGC
GCGGCCCTTAAAACGGGCGATCCAGCGGGAACTGGAAAATCCGATCGCCAATAAAATCTTAGAAACGGCCTTCAACGAGG
GTGATCAGATCACCGTAGACTGGCAGGATGACCAGCTTGTGTTTCTGAAACAGGCTGTTGAAGCCAGACCGGAGCTGATC
GCCAACCCATCTCCAACCGTTGAGACCAGTGCCGAAAAAGTGGCCTCCGGGGTGAAGTAA

Protein sequence :
MQPTDPAKFTDKAWEAIVKSQDVARQFKNQHLEVEHLAIALLEQEGLAGAILARVGADQNLMLKRLADFTKQQPRVPDTS
QLYLGRYLDLLLDQAEAARQTQGDGFISVEHLLLALAEDKRVGRNLYRSMEVDRAKLEKAISDIRGSQKVSDQNPENRYD
ALSKYGRDLTEQARAGKLDPVIGRDEEIRRVVQVLSRRMKNNPVLIGEPGVGKTAIAEGLAQRIINNDVPESLKNRRLIS
LDMGSLIAGAKYRGDFEDRLKAVLHEVTHSDGQIVLFIDELHTVVGAGAGQGNMDAGNLLKPMLARGELRCIGATTLDEY
RKHIEKDAALERRFQQVYIGQPSVEDTISILRGLKDRYEIHHNVKITDSALVAAATLSDRYISDRFLPDKAIDLVDEAAA
KLKMEMTSKPAELEVVERRLMQLEMERLSLEQEENRTKTGIYAAARDRLQRIEQEIAELSPKKDEMAAQWKSEKDVLEQI
NTLKEEEDRVKLQIEQAERDYNLNKAAQLKYGRLETLQRELEAAETKLIDIQANGSTFLRDQVTEADIAEVVAKWTGIPV
NRLLESERQKLLHLETHLHERVVGQEEAVGALAAAIRRARAGMKDPNRPIGSFLFMGPTGVGKTELARALAQFLFDTEEA
LVRVDMSEYMEKNSVARMVGAPPGYVGYDEGGQLTESIRRRPYSVVLLDEVEKAHPDVFNMLLQVLDDGHLTDGQGRTVD
FRNTVIVMTSNIGSEHILDVAGDDSRFEEMRKRVEQALRSHFRPEFLNRVDDIILFHALDRVQLRQIVEIQVRRVQKLMS
DQKIKLDFTAAALDHIVDAGFDPVYGARPLKRAIQRELENPIANKILETAFNEGDQITVDWQDDQLVFLKQAVEARPELI
ANPSPTVETSAEKVASGVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-107 42
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 1e-104 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 1e-104 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyan7425_4582 YP_002485251.1 ATP-dependent chaperone ClpB VFG2076 Protein 9e-115 42
Cyan7425_4582 YP_002485251.1 ATP-dependent chaperone ClpB VFG0079 Protein 3e-144 41
Cyan7425_4582 YP_002485251.1 ATP-dependent chaperone ClpB VFG2084 Protein 9e-111 41