|
Name : Mnod_1958 (Mnod_1958) Accession : YP_002497250.1 Strain : Methylobacterium nodulans ORS 2060 Genome accession: NC_011894 Putative virulence/resistance : Virulence Product : type I secretion system ATPase Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : - Position : 2068574 - 2070793 bp Length : 2220 bp Strand : - Note : KEGG: met:M446_3820 type I secretion system ATPase; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase DNA sequence : ATGGTAGGACAGGTCGCGGCATCGATGGCGGATGCCTCTCCCGAGGGGCCGCGCGCGGCGCAGGCGGCCCCGCCGGTGGC CGGCCCGGATTCCGGTCTCAGCGCGCTCGCCCTCGTCGCCTCCTTCCATCAGGTCGCCTGCGAACCCGCGCAGGTGCGCC ACGAACTCGGCCTGGGCGTGCAGCCGGCCCGCGCGATCGACCTCGTGCGCGGCGCCCGCCACCTCAAGCTCAAGGCGCGC CTGCTCGAGAAGCAGAAGCCCGAGCGCCTGGAGACGATCCCGCTGCCCGCGATCCTGGAACTCGAGGGCGGCCGCTTCGT GCTCCTCGGCCGGCGCCTCGATGACGGCAAGTACCGGATCATCGACGCCGCCGCCCGCACCGCCGAGCACCTTCCCGCCG CGGACGTGGTCGCGCGCTGGACCGGCGCCGTCATCCTGATCGCGCGGCGCGCCAGCCTGCAGAAGGTCATCCACGATTTC GGCCTGAGCTGGTTCGTGCCGTCGATCTGGCGCTACCGCCAGCCGCTCGTCACCGTCCTGGTCGCCTCCTTCTTCATCCA GATCTGCGCGCTCATCACGCCGATCTTCTTTCAGATCACGATCGACAAGGTGCTGACGCACCGGGGCTACTCGACCCTCA CCCTGGTCGCGGTGGGCCTCGTGGTGCTCGGCCTGTTCCACGTGGTGCTGCAGTATCTGCGCAGCTACATCCTCACCCAC ACGACGAGCCGCATCGACGTCGAGCTCGGCGCGCGGCTGTTCGAGCACCTGATGCGCTTGCCGCTCGGCTATTTCGAGAC CCGGCCCGCCGGCCAGACCGTCGCGCGCGTGCGCGAGCTGGAGACGATCCGGGGCTTCCTCACCGGCCAGGCGCTCACCT CGGCGATCGACATCCCCTTCACGCTGCTCTTCCTCGTCATCCTGTACTTCTACTCGCCGCTGCTGGCGCTGATCGTCACG CTGTCGATCCCCTGCTACGTCCTGGTGGCGGTGCTGCTGCGGCCGATCCTGCGCGAGCAGACGCTCGAGCGCTTCAACCG CTCGGCCCTGTCCAACCAGTTCCTGATCGAGTCCGTGGTCGGCATCCACACCATCAAGGCGCTCGCCGTCGAGCCGACCC TGCGCGTGCAGTGGGAGGAGCGGCTCGCCGCCTACGTCAAGACCTCGTTCGTGGCGAGCGTCATCGCCAGCATCGGCCAG AACGCCATCCAGTACATCAACAAGGTGACCACCGCCCTCGTGCTGTTCTTCGGCGCCTACGCGGTCATGAACGGCGACCT GACGGTCGGCAGCCTGATCGCCTTCAACATGATCATGGGGCAGGTGACGGCGCCGATCCTGCGGCTGTCGCAGCTCTGGC AGGACTTCCAGCAGGTCAAGGTGTCGATCGAGCGCCTCGGCGACGTGCTGAACTGCCCCCCTGAGACCCGCTCGATGGGG CAGGCCCATCTGCCGCCGGCCAAGGGCCAGATCACGGTGCGCAACGTGGTGTTCCGCTACCAGCCCGGGACGCCGGAGGT GCTGAAGGACGTGTCGATCGAGATCCCGGCCGGTCAGGTGCTCGGCATCGTCGGCCCCTCGGGCTCGGGCAAGTCGACCT TCACCAAGCTCCTGCAGCGCCTCTACGTGCCGGAGAAGGGGCAGGTGCTGATCGACGGCATCGACATCGCGCAGGTCGAT CCCGCCTGGCTGCGGCGCCAGATCGGCGTCGTGCTGCAGGAGAACCTGCTGTTCCACAAGACCGTGTTCGAGAACATCGC GCTCGCCAATCCGGGCCTGTCGCGCGCGCAGGTGATCCAGGTGGCGCGGCTCGCCGGCGCCGACGAGTTCATCAACCGCC TGCCGCTCGGCTACGACACGCCGATCGAGGAGCGCGGCGCGAACCTGTCGGGCGGCCAGCGCCAGCGGCTGGCCATCGCG CGGGCGCTCGCCACCAACCCGCGCATCCTGATCCTCGACGAGGCGACCTCCGCCCTCGACTACGAGAGCGAGCGCATCAT CCAGGAGAACATGAAGCACATCGTGCGGGGACGCACGGTGATCATCATCGCCCACCGCCTCGCGGCGGTGCGGGGCTGCG ACCGCATCATCACCCTGCAGGACGGGCGCATCGTCGAGGACGGCACCCATCGCGAGCTCCTCGAGCACCCGGCCTCCCTG TACGGGCGCCTGTGGCGCATGCAGTCCGACCATGGATCCGAGCAGGGAGCCGCCGCGTGA Protein sequence : MVGQVAASMADASPEGPRAAQAAPPVAGPDSGLSALALVASFHQVACEPAQVRHELGLGVQPARAIDLVRGARHLKLKAR LLEKQKPERLETIPLPAILELEGGRFVLLGRRLDDGKYRIIDAAARTAEHLPAADVVARWTGAVILIARRASLQKVIHDF GLSWFVPSIWRYRQPLVTVLVASFFIQICALITPIFFQITIDKVLTHRGYSTLTLVAVGLVVLGLFHVVLQYLRSYILTH TTSRIDVELGARLFEHLMRLPLGYFETRPAGQTVARVRELETIRGFLTGQALTSAIDIPFTLLFLVILYFYSPLLALIVT LSIPCYVLVAVLLRPILREQTLERFNRSALSNQFLIESVVGIHTIKALAVEPTLRVQWEERLAAYVKTSFVASVIASIGQ NAIQYINKVTTALVLFFGAYAVMNGDLTVGSLIAFNMIMGQVTAPILRLSQLWQDFQQVKVSIERLGDVLNCPPETRSMG QAHLPPAKGQITVRNVVFRYQPGTPEVLKDVSIEIPAGQVLGIVGPSGSGKSTFTKLLQRLYVPEKGQVLIDGIDIAQVD PAWLRRQIGVVLQENLLFHKTVFENIALANPGLSRAQVIQVARLAGADEFINRLPLGYDTPIEERGANLSGGQRQRLAIA RALATNPRILILDEATSALDYESERIIQENMKHIVRGRTVIIIAHRLAAVRGCDRIITLQDGRIVEDGTHRELLEHPASL YGRLWRMQSDHGSEQGAAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyB | NP_755448.1 | hemolysin B | Virulence | PAI I CFT073 | Protein | 2e-164 | 51 |
| hlyB | CAD33760.1 | hemolysin B | Virulence | PAI I 536 | Protein | 2e-164 | 51 |
| hlyB | CAD42038.1 | HlyB protein | Virulence | PAI II 536 | Protein | 2e-164 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Mnod_1958 | YP_002497250.1 | type I secretion system ATPase | VFG1557 | Protein | 1e-164 | 51 |
| Mnod_1958 | YP_002497250.1 | type I secretion system ATPase | VFG1501 | Protein | 1e-164 | 51 |
| Mnod_1958 | YP_002497250.1 | type I secretion system ATPase | VFG0907 | Protein | 9e-165 | 51 |
| Mnod_1958 | YP_002497250.1 | type I secretion system ATPase | VFG0841 | Protein | 3e-157 | 50 |
| Mnod_1958 | YP_002497250.1 | type I secretion system ATPase | VFG1269 | Protein | 5e-150 | 47 |
