Gene Information

Name : Ccel_0327 (Ccel_0327)
Accession : YP_002504694.1
Strain : Clostridium cellulolyticum H10
Genome accession: NC_011898
Putative virulence/resistance : Virulence
Product : ATPase AAA
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 377562 - 379994 bp
Length : 2433 bp
Strand : +
Note : PFAM: UvrB/UvrC protein; ATPase AAA central domain protein; Clp domain protein; Torsin; ATPase associated with various cellular activities AAA_5; ATPase AAA; SMART: ATPase AAA; KEGG: cth:Cthe_1789 ATPase AAA-2

DNA sequence :
ATGTATCAACGTTTTACAGAAAAGGCAGAGAGGGCTATAGGATTTTCCCAGCAGGCTGCCGTAGATTTGGGGCATAATTA
TGTCGGTACTGAACATATACTCTTAGGACTTGTAAAAGAAGGAACAGGTGTTGCAGCAAGGGTACTTCAAGGTCAGGGAA
TAACCGAGGAGAAAATTCTCAAAGAGATTGAAGAACTTATCGGAAAAGGAGATGCCGAGGGAACACAGCCTGTAGGGTTT
ACTCCCAGAACAAAGAGAGTGCTCGAGCTTGCTTTTAAAGAGGCAAGAAGAATGGGACAGGGCTACATTGGTACGGAGCA
TCTGCTTTTAGGGATTATGAAAGAAGGAGAAAGTGTTGCAGTCAGGATTCTGATGGATTTGGGAGTAGACCCCCAAAAGC
TTCTGAATGAGCTTGTTAAAATTCTTACGGAAGAGACTCCGGGTTCCAACGGGTCTGCAAAGGGAAACAGTTCAAACTCA
AATACACCGACCTTGAACCAGTTTGGCAGGGATTTAACTGATATGGCAAGAGACGGGAAAATTGACCCTGTTATAGGGCG
AGACAAGGAAATTGAAAGGGTTATTCAAATCCTTAGCAGAAGAACCAAAAATAATCCATGTTTAATAGGGGAGCCTGGGG
TAGGTAAGACTGCCATAGCAGAAGGTCTGGCCCAAAAAATTGTAGAGGGAAATATCCCCGAGATTTTAAGCAACAAGAGA
GTTGTTACCCTTGATTTATCCTCAATGGTTGCAGGTGCAAAGTACAGAGGTGAATTTGAAGACAGGCTTAAAAAGGCAAT
GGAAGAAATCAGAAAGGCGGCAAACGTCATATTGTTCATTGATGAGCTGCATACAATAGTAGGTGCAGGAGCAGCTGAAG
GTGCAATTGATGCATCAAACATACTCAAGCCATCCCTTGCAAGAGGTGAAATTCAGGTTATAGGTGCAACCACCTTAAAT
GAGTACAGAAAACATATAGAAAAGGACGCAGCTCTTGAAAGAAGATTTCAACCTATAACCGTAGGGGAGCCTTCCAAGGA
AGAGGCTGTTGAAATATTAAAGGGCGTTCGTGATAAGTATGAGGCACACCATAGGGTAAAGATTACCGATGATGCACTCG
AAGCCGCAGTCAAGTTGGGGGACAGATATATAACAGACAGATTTCTGCCGGACAAGGCTATTGACCTGATTGATGAGGCG
GCTTCCAGAATAAGGCTAAAAACCTTTACGGCTCCGCCAGATTTAAAGGAAATGGAAGAGAGGGTTGAAAAACTAGGTAA
GGAAAAAGAAGATGCCATCAGATGTCAGGAGTTTGAAAAAGCCGCAAGAATAAGGGATGATGAGCAAAAGCTAAAAAGTG
AGCTGGAAAAGATAAGGGACCAATGGCATCAGAAGAATCAAACCAAGACAGATACTGTTACTGAGGACGATATAGCAGAT
ATTGTTGCCAGTTGGACAGGTATACCTGTAAGACGTCTTGCCGAAGAAGAATCCGAAAGACTCCTGAAAATGGAGGATAC
ACTCCACAAGCGTGTAATCGGTCAGGATGAAGCGGTAAAATCAATATCAAAAGCTATCAGAAGGGGACGTGTAGGACTGA
AAGACCCAAAACGACCGGTTGGATCATTTATATTTATGGGCCCCACCGGAGTAGGTAAGACTGAGCTTTGTAAAGCATTG
GCAGAAGCAATGTTCGGCGATGAAAAGTCAATGATTCGTGTTGATATGTCCGAGTTCATGGAAAAGCACAGCGTGTCCAA
ACTGGTAGGTTCACCTCCGGGCTACGTAGGCTATGACGAGGGCGGGCAGCTTACTGAAAGGGTAAGAAGAAAGCCGTATT
CAGTCCTTCTGTTTGATGAAATAGAAAAGGCACATCCCGATATTTTCAATATACTGTTACAAATACTTGAGGATGGCAGA
CTTACCGATTCACAGGGGCGTGTGGTCGATTTCAGAAATACCATAATAATCATGACATCGAATGTGGGTGCTAGGACAAT
TACTGAACCTAAAAGACTTGGATTCTCAGCTTCAAATGATGAGAGTGCAAAGAATTATGAGGATATGAAGAGCAATGTAA
TGAGCGAACTTAAAAAGATGTTCAGGCCGGAGTTCCTTAACAGGATTGATGATATAATTGTTTTCCACCCGTTAAGCAAG
GAAAACATAAAAGAAATTGTACGCCTCATGCTGGATGTTCTTGTAAATAGACTCAAGGCTAATGAAATAATAATGGAAGT
TAGTGAAGAGGCCATGGGATATCTGGCACAAAAGGGCTTCGACCCTGTGTTTGGAGCAAGACCTTTAAGACGTGCAATTC
AAAGTATGGTAGAGGATAAGCTGGCAGAAGACATGCTTGAAGGAAAGGTCAAAGCCGGAGATAGCATCAGAATAGACTTA
GACGGAGAAAATATTGTTGTTATTAAAAAGTAA

Protein sequence :
MYQRFTEKAERAIGFSQQAAVDLGHNYVGTEHILLGLVKEGTGVAARVLQGQGITEEKILKEIEELIGKGDAEGTQPVGF
TPRTKRVLELAFKEARRMGQGYIGTEHLLLGIMKEGESVAVRILMDLGVDPQKLLNELVKILTEETPGSNGSAKGNSSNS
NTPTLNQFGRDLTDMARDGKIDPVIGRDKEIERVIQILSRRTKNNPCLIGEPGVGKTAIAEGLAQKIVEGNIPEILSNKR
VVTLDLSSMVAGAKYRGEFEDRLKKAMEEIRKAANVILFIDELHTIVGAGAAEGAIDASNILKPSLARGEIQVIGATTLN
EYRKHIEKDAALERRFQPITVGEPSKEEAVEILKGVRDKYEAHHRVKITDDALEAAVKLGDRYITDRFLPDKAIDLIDEA
ASRIRLKTFTAPPDLKEMEERVEKLGKEKEDAIRCQEFEKAARIRDDEQKLKSELEKIRDQWHQKNQTKTDTVTEDDIAD
IVASWTGIPVRRLAEEESERLLKMEDTLHKRVIGQDEAVKSISKAIRRGRVGLKDPKRPVGSFIFMGPTGVGKTELCKAL
AEAMFGDEKSMIRVDMSEFMEKHSVSKLVGSPPGYVGYDEGGQLTERVRRKPYSVLLFDEIEKAHPDIFNILLQILEDGR
LTDSQGRVVDFRNTIIIMTSNVGARTITEPKRLGFSASNDESAKNYEDMKSNVMSELKKMFRPEFLNRIDDIIVFHPLSK
ENIKEIVRLMLDVLVNRLKANEIIMEVSEEAMGYLAQKGFDPVFGARPLRRAIQSMVEDKLAEDMLEGKVKAGDSIRIDL
DGENIVVIKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 56
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-102 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ccel_0327 YP_002504694.1 ATPase AAA VFG0079 Protein 0.0 61
Ccel_0327 YP_002504694.1 ATPase AAA VFG0080 Protein 2e-163 54
Ccel_0327 YP_002504694.1 ATPase AAA VFG2084 Protein 1e-98 41