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Name : Tgr7_2331 (Tgr7_2331) Accession : YP_002514398.1 Strain : Thioalkalivibrio sulfidophilus HL-EbGR7 Genome accession: NC_011901 Putative virulence/resistance : Unknown Product : DNA-directed RNA polymerase subunit beta Function : - COG functional category : K : Transcription COG ID : COG0085 EC number : - Position : 2452871 - 2456947 bp Length : 4077 bp Strand : - Note : KEGG: aeh:Mlg_0451 DNA-directed RNA polymerase, beta subunit DNA sequence : ATGGCCTACAGCTACACCGAAAAGAAACGCATCCGCAAGGATTTCGGCAAACGCCCCCAGATCCTCGATGTCCCCTACCT GTTGACCACGCAGCTGGATTCATACCGCCAGTTTCTGCAGGCCGACCGCAGCGAGGATAATCGACAGGACGTGGGCCTGC ACGCGGCGTTCAAGACGGTGTTCCCCATTGTGAGTTACTCGGGCACCGTTGAACTCGAATACGTGAGCTACCGCCTCGGC AAGCCGGTGTTCGACGTCAAGGAGTGCCAGCTGCGCGGCATGACCTATGCCGCTCCCCTGCGCGTGCTGCTGCGCCTGGT GATCTATGACAAGGACGCCCCTGCGGGCTCCCGCGTGGTCAAGGACATCAAGGAGCAGGAAGTCTACATGGGCGAACTGC CGCTCATGACCGAGAACGGCACCTTCGTGATCAACGGTACCGAGCGGGTGATCGTCTCCCAGCTGCACCGTTCGCCGGGC GTGTTCTTCGACCACGACAAGGGCAAGACACACAGCTCGGGCAAGCTGCTGTTCAATGCCCGCGTGATCCCCTACCGCGG TTCCTGGCTGGACTTCGAGTTCGATCCCAAGGACAGCGTGTTCGTGCGCATCGACCGCCGCCGCAAGCTGCCGGCCACGG TGCTGCTGCGCGCCCTGGGCATGGAGACCGAGGAGATCCTCGCCACCTTCTTCGAGACCAACACCGTCAGCATCACCAAG GACGGTTTCGACATGGAGCTGATCCCCGAGCGTCTGCGCGGTGAAGTGGCAGCCTTCGACTTCAAGGTGAAGAACAAGGT GCTGGTGGAAAGCGGGCGTCGCATCACCGCCCGTCACGTGCGCGAGCTGGAGGCCGCCGGGATCAAGTCCCTGGAAGTGC CCGCCGAGTACCTGGTGGGCAAGGTGCTGGCCCACGCGGTCATCGACGAGGACAGCGGCGAGCTGGTGGCCAACGCCAAC GACGAGATCACCGATGAGCTGCTGAAGAAGCTGCGCGCCGCCGGCATCAAGTCGTTCAAGACCCTGTACACCAACGACCT GGACCACGGTCCGTATATCTCCACCACCCTGAACATCGACACCTGCCGCTCCCAGCTGGAGGCGCAGGTGGAGATCTACC GCATGATGCGTCCCGGCGAGCCCCCCACCAAGGAGGCCGCGGAGAACCTGTTCAACAACCTGTTCTTCACCGAGGAGCGC TACGACCTCTCCGCCGTGGGCCGCATGAAGTTCAACCGTCGCGTGGGCCGCGAGGAGATCACCGGTCCCGGCGTGCTGGA CAAGGACGACATCCTGGCGGTGCTCAAGACCCTGATCGACATCCGCAACGGCAACGGCCAGGTGGATGACATCGACCACC TGGGCAACCGCCGCGTGCGTTCCGTGGGCGAGATGGCGGAGAACGTCTTCCGTGTCGGCCTGGTGCGCGTCGAGCGCGCC GTGAAGGAGCGCCTGAGCGTCGCCGAGAGCGAAGGCCTCATGCCCCAGGAACTGATCAACGCCAAGCCCGTGGCGGCGGC GGTGAAGGAGTTCTTCGGCTCCAGCCAGCTGTCCCAGTTCATGGACCAGAACAACCCGCTCTCCGAGGTGACCCACAAGC GCCGCATCTCGGCCCTGGGCCCCGGCGGCCTGACCCGCGAGCGTGCCGGCTTCGAGGTGCGCGACGTGCACCCGACCCAT TACGGCCGCGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTCGCCGTGTATGCACGTAC CAACGATTACGGTTTCCTGGAGACCCCCTACCGCAAGGTGGAAAACGGCAAGGTGACCAACGAGATCGTGTACCTGTCCG CCATCGAGGAAGGCCAGTACGTGATCGCCCAGGCCAACGCCAGTCTGGATGCCAAGGGCAACCTGGTGGACGAACTGGTG TCCTGCCGCCACGCCAATGAATTCACCATGTCCACCCCGGACAAGATCGAGTTCATGGACATCTCGCCCAAGCAGATCGT GTCCGTGGCCGCCGCGCTGATCCCGTTCCTGGAGCACGACGACGCCAACCGCGCGCTGATGGGCTCCAACATGCAGCGCC AGGCCGTGCCCTGCCTGCGTGCCGAGACCGCCGTGGTGGGGACCGGCATCGAGCGCACCGTGGCCATCGACTCCGGTTCC TCCATCGTCGCCCGCCGTGGCGGCGTGGTGGACTCCGTGGACGCCGCCCGCATCGTGGTGCGCGTCAATGACGATGAGAC CGAGGCTGGCGAGCCGGGCGTGGACATCTACAACCTGACCAAGTACACCCGCTCCAACCAGAACACCTGCATCAACCAGC GTCCGCTGGTGAACGTGGGGGACGTGCTGGCCCGGGGCGACGTGCTGGCCGACGGTTCCTCCACGGATCTGGGCGAGATG GCCCTGGGGCAGAACATGATGGTCGCCTTCATGCCCTGGAACGGCTACAACTTCGAGGACTCCATCCTCATCTCCGAACG CGTGGTGCAGGAGGATCGTTTCACCTCCATCCACATCGAGGAGCTGACCTGCGTGGCCCGCGACACCAAGCTCGGGCCGG AGGAGATCAGCGCGGACATCCCGAACGTGTCCGAGAGCCTGCTCTCCAAGCTGGATGAGTCCGGCATCGTGTACGTGGGC GCCGAGGTCAAGCCCAACGACATCCTGGTGGGCAAGGTCACGCCCAAGGGCGAGACCCAGCTGACCCCGGAAGAGAAGCT GCTGCGCGCCATCTTCGGTGAGAAGGCCTCCGACGTGAAGGACACCTCCCTGCGCGTGCCCTCCGGCATGGAAGGCACTG TGATCGACGTGCGCGTGTTCACCCGCGACGGCGTCGACAAGGACAAGCGTGCCCTGCAGATCGAGGAGGCGGCGCTGGCC GCCGTGCGCAAGGATCTCAAGGACCAGCTGCGCATCTACGAGGACGACATCTACGACCGCGTCGAGAAGCTGCTGGTGGG CAAGCTGGCCGCCGGTGGCCCCAACAAGCTCAAGGACGGCACCAAGGTCACCAAGACCTACCTTACCGAGGTGCCCCGCG AGAAGTGGTTCGAGGTGCGCATGCGCACCGAAGAGGTCAACGAGCAGCTGGAGAAGATGGCTGCATCCCTGAAGGAGCAG CACGAGGCCTTCGAGACCCGCTTCAAGGAGCAGAAGGAAAAGCTCACTCAGGGTGACGATCTCGCCCCCGGCGTGCTGAA GATGGTCAAGGTCTACCTGGCCGTGAAGCGCCGCATGCAGCCCGGCGACAAGATGGCCGGCCGCCACGGTAACAAGGGTG TGGTCTCCATGATCGTGCCCGTGGAAGACATGCCGTATCTGGAAGACGGCACCCCCGTGGACATCGTGCTCAACCCGCTC GGCGTGCCTTCCCGTATGAACGTGGGTCAGGTGCTCGAGACCCATCTGGGCTGGGCCGCCAAGGGTCTGGGCCAGAAGAT CGGCCGCATGGTCGAGGCCAAGGCCAAGATCGACGAACTGCGCAAGTTCCTCGACAAGATCTACAACCACAGTGCCAAGA AGGTGGATCTGTCCGATTTCAGCGACGAGGAGATCCTCAAGCTGTGCGCCAACCTGAAGAAGGGCGTGCCCATGGCGACC CCGGTGTTCGACGGTGCCGAGGAAGAAGAGATCAAGGCCATGCTGAAGCTGGCCGATCTGCCCGAGAGCGGTCAGACCAC CCTGTTCGACGGTCGTACCGGCGAGTCCTTCGACCGTCCCGTGACCGTGGGTTACATGCACATGCTCAAGCTCAACCACC TGGTGGATGACAAGATGCATGCCCGTTCCACCGGTCCGTACAGCCTGGTGACCCAGCAGCCGCTGGGTGGTAAGGCGCAG TTCGGTGGTCAGCGCTTCGGCGAGATGGAGGTCTGGGCGCTGGAGGCCTATGGCGCCGCCTACACCCTGCAGGAGATGCT CACGGTGAAGTCCGACGACGTTCAGGGCCGCAACAAGATGTACAAGAACATCGTCGACGGCGACCACCGGATGGAGGCGA ACATTCCGGAGTCCTTCAACGTGCTGATGAAGGAAATCCGTTCGCTGGCCATCAACATCGAGCTGGAACAGGACTAA Protein sequence : MAYSYTEKKRIRKDFGKRPQILDVPYLLTTQLDSYRQFLQADRSEDNRQDVGLHAAFKTVFPIVSYSGTVELEYVSYRLG KPVFDVKECQLRGMTYAAPLRVLLRLVIYDKDAPAGSRVVKDIKEQEVYMGELPLMTENGTFVINGTERVIVSQLHRSPG VFFDHDKGKTHSSGKLLFNARVIPYRGSWLDFEFDPKDSVFVRIDRRRKLPATVLLRALGMETEEILATFFETNTVSITK DGFDMELIPERLRGEVAAFDFKVKNKVLVESGRRITARHVRELEAAGIKSLEVPAEYLVGKVLAHAVIDEDSGELVANAN DEITDELLKKLRAAGIKSFKTLYTNDLDHGPYISTTLNIDTCRSQLEAQVEIYRMMRPGEPPTKEAAENLFNNLFFTEER YDLSAVGRMKFNRRVGREEITGPGVLDKDDILAVLKTLIDIRNGNGQVDDIDHLGNRRVRSVGEMAENVFRVGLVRVERA VKERLSVAESEGLMPQELINAKPVAAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRISALGPGGLTRERAGFEVRDVHPTH YGRVCPIETPEGPNIGLINSLAVYARTNDYGFLETPYRKVENGKVTNEIVYLSAIEEGQYVIAQANASLDAKGNLVDELV SCRHANEFTMSTPDKIEFMDISPKQIVSVAAALIPFLEHDDANRALMGSNMQRQAVPCLRAETAVVGTGIERTVAIDSGS SIVARRGGVVDSVDAARIVVRVNDDETEAGEPGVDIYNLTKYTRSNQNTCINQRPLVNVGDVLARGDVLADGSSTDLGEM ALGQNMMVAFMPWNGYNFEDSILISERVVQEDRFTSIHIEELTCVARDTKLGPEEISADIPNVSESLLSKLDESGIVYVG AEVKPNDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPSGMEGTVIDVRVFTRDGVDKDKRALQIEEAALA AVRKDLKDQLRIYEDDIYDRVEKLLVGKLAAGGPNKLKDGTKVTKTYLTEVPREKWFEVRMRTEEVNEQLEKMAASLKEQ HEAFETRFKEQKEKLTQGDDLAPGVLKMVKVYLAVKRRMQPGDKMAGRHGNKGVVSMIVPVEDMPYLEDGTPVDIVLNPL GVPSRMNVGQVLETHLGWAAKGLGQKIGRMVEAKAKIDELRKFLDKIYNHSAKKVDLSDFSDEEILKLCANLKKGVPMAT PVFDGAEEEEIKAMLKLADLPESGQTTLFDGRTGESFDRPVTVGYMHMLKLNHLVDDKMHARSTGPYSLVTQQPLGGKAQ FGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVQGRNKMYKNIVDGDHRMEANIPESFNVLMKEIRSLAINIELEQD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00346 | YP_008207811.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR25 | Protein | 0.0 | 69 |
| BJAB0868_00350 | YP_008211676.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR26 | Protein | 0.0 | 69 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Tgr7_2331 | YP_002514398.1 | DNA-directed RNA polymerase subunit beta | NC_002516.2.881699.p | Protein | 0.0 | 75 |
| Tgr7_2331 | YP_002514398.1 | DNA-directed RNA polymerase subunit beta | CP000034.1.gene3741. | Protein | 0.0 | 73 |
| Tgr7_2331 | YP_002514398.1 | DNA-directed RNA polymerase subunit beta | CP000675.2.gene392.p | Protein | 0.0 | 73 |
| Tgr7_2331 | YP_002514398.1 | DNA-directed RNA polymerase subunit beta | NC_002695.1.914942.p | Protein | 0.0 | 72 |
| Tgr7_2331 | YP_002514398.1 | DNA-directed RNA polymerase subunit beta | CP004022.1.gene2794. | Protein | 0.0 | 72 |
| Tgr7_2331 | YP_002514398.1 | DNA-directed RNA polymerase subunit beta | CP001918.1.gene250.p | Protein | 0.0 | 72 |
| Tgr7_2331 | YP_002514398.1 | DNA-directed RNA polymerase subunit beta | CP001138.1.gene4362. | Protein | 0.0 | 72 |
| Tgr7_2331 | YP_002514398.1 | DNA-directed RNA polymerase subunit beta | CP000647.1.gene4402. | Protein | 0.0 | 72 |
| Tgr7_2331 | YP_002514398.1 | DNA-directed RNA polymerase subunit beta | NC_009085.4918494.p0 | Protein | 0.0 | 69 |
| Tgr7_2331 | YP_002514398.1 | DNA-directed RNA polymerase subunit beta | NC_010611.6233925.p0 | Protein | 0.0 | 69 |
| Tgr7_2331 | YP_002514398.1 | DNA-directed RNA polymerase subunit beta | NC_011595.7060572.p0 | Protein | 0.0 | 69 |
| Tgr7_2331 | YP_002514398.1 | DNA-directed RNA polymerase subunit beta | NC_010410.6003841.p0 | Protein | 0.0 | 69 |
| Tgr7_2331 | YP_002514398.1 | DNA-directed RNA polymerase subunit beta | NC_011586.7046027.p0 | Protein | 0.0 | 69 |
| Tgr7_2331 | YP_002514398.1 | DNA-directed RNA polymerase subunit beta | NC_010400.5987325.p0 | Protein | 0.0 | 69 |
| Tgr7_2331 | YP_002514398.1 | DNA-directed RNA polymerase subunit beta | NC_008702.1.4609796. | Protein | 0.0 | 69 |
| Tgr7_2331 | YP_002514398.1 | DNA-directed RNA polymerase subunit beta | CP002695.1.gene18.p0 | Protein | 0.0 | 68 |
| Tgr7_2331 | YP_002514398.1 | DNA-directed RNA polymerase subunit beta | NC_011035.1.6448762. | Protein | 0.0 | 67 |
| Tgr7_2331 | YP_002514398.1 | DNA-directed RNA polymerase subunit beta | AM180355.1.gene120.p | Protein | 0.0 | 49 |
| Tgr7_2331 | YP_002514398.1 | DNA-directed RNA polymerase subunit beta | NC_012469.1.7686402. | Protein | 0.0 | 46 |
| Tgr7_2331 | YP_002514398.1 | DNA-directed RNA polymerase subunit beta | CP001581.1.gene3846. | Protein | 0.0 | 46 |
