Gene Information

Name : Tgr7_R0043 (Tgr7_R0043)
Accession : -
Strain : Thioalkalivibrio sulfidophilus HL-EbGR7
Genome accession: NC_011901
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2548250 - 2549775 bp
Length : 1526 bp
Strand : -
Note : RNAmmer 1.2, Lagesen et al., Nucleic Acids Res. Apr2 2, 2007

DNA sequence :
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCATGCCTAACACATGCAAGTCGAACGGTAACAGGGGCTTCGGCCC
GCTGACGAGTGGCGGACGGGTGAGTAACGCGTAGGAATCTGCCTGGTGGTGGGGGACAACTCGGGGAAACTCGAGCTAAT
ACCGCATACGCCCTACGGGGGAAAGCGGGGGATCTTCGGACCTCGCGCCATCAGATGAGCCTGCGTCCGATTAGCTAGTT
GGTGGGGTAATGGCCTACCAAGGCGACGATCGGTAGCTGGTCTGAGAGGACGATCAGCCACACTGGGACTGAGACACGGC
CCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGATCCAGCAATGCCGCGTGTGTGAAG
AAGGCCTGCGGGTTGTAAAGCACTTTCAGTAGAGAAGAAAAGCCTGGCGTTAATACCGTCGGGTCTTGACGTAACCTACA
GAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAA
AGCGCACGTAGGCGGCCTTGTAAGTCGGATGTGAAAGCCCCGGGCTTAACCTGGGAATTGCATCCGATACTGCAGGGCTA
GAGTTTGGTAGAGGAGAGTGGAATTCCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACACCAGTGGCGAAGGCG
ACTCTCTGGACCAAAACTGACGCTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGT
AAACGATGAGAACTAGCCGTTGGGAGGATTATGCCTCTTAGTGGCGCAGCTAACGCATTAAGTTCTCCGCCTGGGGAGTA
CGGCCGCAAGGTTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGC
GAAGAACCTTACCTGCCCTTGACATCCTCGGAACTTGTCAGAGATGACTTGGTGCCTTCGGGAACCGAGTGACAGGTGCT
GCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCCCTAGTTGCCAGC
ACTTCGGGTGGGAACTCTAGGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTT
ATGGGCAGGGCTACACACGTGCTACAATGGCCAGTACAGAGGGTTGCCAACCCGCGAGGGGGAGCCAATCCCAGAAAGCT
GGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCGGATCAGCATTGCCGCGG
TGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTTGGCTGCACCAGAAGTAGATAGTCTAACCTT
CGGGAGGACGTTTACCACGGTGTGGTCAATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGA
TCACCT

Protein sequence :
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-149 89.3
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-149 89.3
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-261 88.1
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-261 88.1
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-261 88
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-261 88