Gene Information

Name : Tgr7_3197 (Tgr7_3197)
Accession : YP_002515253.1
Strain : Thioalkalivibrio sulfidophilus HL-EbGR7
Genome accession: NC_011901
Putative virulence/resistance : Virulence
Product : carboxysome shell protein, CsoS1C
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 3346830 - 3347129 bp
Length : 300 bp
Strand : -
Note : KEGG: tbd:Tbd_2646 carboxysome shell protein, CsoS1C

DNA sequence : 
ATGGCTAATGAACGTTTTGGTGTGGCCCTCGGCATGATCGAGACCCGTGGTCTGGTTCCCGCGATCGAAGCGGCTGATGC
CATGACCAAGGCCTCCGAAGTGCGCCTGATCGGCCGTCAGTTCGTGGGTGGTGGTTATGTGACCGTGCTGGTGCGCGGTG
AGACGGGTGCTGTGAACGCCGCCGTGCGTGCCGGCGCCGATGCCTGCGAGCGCGTGGGTGACGGCCTGGTGGCTGCTCAC
ATCATCGCCCGTGTGCATTCCGAAGTGGAAAGCATCCTGCCCGAGCGCGTGGAAAAGTAA

Protein sequence : 
MANERFGVALGMIETRGLVPAIEAADAMTKASEVRLIGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAH
IIARVHSEVESILPERVEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 4e-11 54
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 6e-11 50
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 4e-10 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tgr7_3197 YP_002515253.1 carboxysome shell protein, CsoS1C VFG1596 Protein 2e-11 54
Tgr7_3197 YP_002515253.1 carboxysome shell protein, CsoS1C VFG1597 Protein 3e-11 50
Tgr7_3197 YP_002515253.1 carboxysome shell protein, CsoS1C VFG1598 Protein 2e-10 47