|
Name : trd_0477 (trd_0477) Accession : YP_002521724.1 Strain : Thermomicrobium roseum DSM 5159 Genome accession: NC_011959 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG3958 EC number : - Position : 475001 - 475963 bp Length : 963 bp Strand : + Note : identified by match to protein family HMM PF02779; match to protein family HMM PF02780 DNA sequence : ATGAATATCGGGACACGGGCTGGTTTACGCATGGGAAAGGCGACCCGGGATGCCTTTGGCGAAGCCCTGCGTGATCTCGG GGGCGTCTATCCTGATCTGGTCGTGGTCGACGGCGATGTGAGCAACTCGACGAGAACCGAGTATTTTGCCCAGGCGTTTC CCCAGCGGTTCTTCAATGTCGGCATTGCGGAATCGAATTTGATCGGGGTGGCCTCTGGCCTGGCTGCCAGCGGTAAGCGC GTGGTCGCTGCGAGCTTCGCGTGTTTCCTCCTGTGCAATGCATTCGATCAAATCCGCATGGGAGTTGCCTATCCGCGCCT CAACGTCAAGCTCGTCGGAAGTCACGCGGGTATCAGCATCGGTGAGGACGGGCCGTCGCAGATGGGAATCGAAGATGTCG CCCTTGCACTCTCCTTGCCGGGCGTGGCCGTGCTCGTGCCAGCCGACGAGCATGCGACGCGGGCCGCCACGCGGGCGATG CTGGAATGGGAGGGGCCGACCTACCTGCGCTTGGGCCGACCGCCTGTACCGGTCATCTACGAGCCACCAGTCGACTTCGT GATCGGTCGTGCCTTTCGTCTGCGCGAGGGGAACGACGTGACGATCATCGCGAATGGTCTCATGGTTGCGATGGCACTCG ATGCTGCTGAGGAACTCGCTGCTCGTGGTGTGCAGGCGCGTGTCCTCGACATGGCCACGGTGCGCCCGCTCGATGTCGAT GCGGTGATCGCAGCGGCGCGCGAGACGCGTGGCATCGTGGTTGCCGAGGAGCACCTGCACTATGGGGGACTGGGGAGCGT CGTCGCCATGGCGGTCAGCCAGCACCATCCGTGTCCCATGCGTTTCGTGGATCTGGATGATCGCTATGCTGAGTCGGGCG CACCGGATGACTTGTTGCGGGCCTATGGCTTGACGAGCGAGCGCATCGTGGCTGCTGCCCTCGAACTCACCGAACGGATC TAA Protein sequence : MNIGTRAGLRMGKATRDAFGEALRDLGGVYPDLVVVDGDVSNSTRTEYFAQAFPQRFFNVGIAESNLIGVASGLAASGKR VVAASFACFLLCNAFDQIRMGVAYPRLNVKLVGSHAGISIGEDGPSQMGIEDVALALSLPGVAVLVPADEHATRAATRAM LEWEGPTYLRLGRPPVPVIYEPPVDFVIGRAFRLREGNDVTIIANGLMVAMALDAAEELAARGVQARVLDMATVRPLDVD AVIAAARETRGIVVAEEHLHYGGLGSVVAMAVSQHHPCPMRFVDLDDRYAESGAPDDLLRAYGLTSERIVAAALELTERI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96118.1 | transketolase | Not tested | T-PAI | Protein | 4e-27 | 41 |
