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Name : trd_A0109 (trd_A0109) Accession : YP_002523391.1 Strain : Genome accession: NC_011961 Putative virulence/resistance : Unknown Product : cysteine desulfurase, (m-Nfs1) Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1104 EC number : 2.8.1.7 Position : 104585 - 105778 bp Length : 1194 bp Strand : + Note : identified by match to protein family HMM PF00266; match to protein family HMM PF01212 DNA sequence : GTGGGACCGACTGATCGAGGCCGAGATAGTGCCAATGTCATGAGCGTCAGACCGATCTATCTCGATTACCATGCGACGAC CCCCTGCGACCCGCGCGTCGTCGAGGTGATGTTGCCGTATTTGACCGGCGACTTCGGCAACCCAGCCTCGGGGTTCCACG TCTACGGCCGTCGCGCCGCACGAGCCGTCGAGATGGCCCGCGAGCAGGTCGCTGCACTCATCGGTGCACAGGCAAGCGAG ATAGTGTTTACGAGTGGAGCAACCGAGAGCAACAACCTCGTGCTTTTGGGCCTCACCAGCAGCGACCAGTCACGACGACG GATCGTTACGACGGCTGTCGAACACAAGTCCGTCCTGGAACCGTGCCGGATCCTTCATGAGCGCGGCTTCGAGGTCGTCG TCTTACCTGTCCTGCCAGACGGGACGGTCGACCTGGCTGCAGCAGAGGCTGCCATCAACGAGGAGACACTTCTCGTCAGC GTCCAGACAGCGAACAACGAGATCGGATCTATCCAGCCGATCGCGGTGCTCGCCGAACTTGCACATCGCCGTGGTGCACT GCTCCACACCGATGCGGCTCAGGCGGTTGGCAAAATCCCTTTCAACGTCGAGGAACTTGGCATCGATTTCGCCTCGGTTA GCGCTCACAAGTTATACGGACCGAAGGGGATCGGTGCTCTCTACGTACGGAGCGGCCTGCGACGACGTCTGACTCCCCTC CTGCTCGGGGGTGGGCAAGAGTTCAACCTCCGGCCAGGTACGCTGAACGTCCCGGCTATTGTGGGATTCGGCGAAGCGTG CCGGCTTGCCCGTGAGGAGATGCCTGAAGAGGCAAGGCGAGTCGCAGCCCTGCGCGACCTCCTCGAGAGTCAACTGGCGA ATCGGATTCCCGGGCTCCGTTTCAATGGTCATCGCACGCGCCGATTGCCGGGAAACAGCAGTATCACCTTTCCGAAAATC GAGGCGGATGTCCTGATCGCGAACGTACCCGAAGTTGCACTGAGCACAGGATCGGCATGCTCGTCAGGGACGATCGAGCC TTCTCACGTCCTGACTGCAATCGGCCTCGACTGGGAAGAAGCGCATGCGACGATCCGGATCGGGATCGGACGGTTCACGA CGCGCGAGGAGATCGAGCGCGCCGCGCACCTGATCGCGATAGCCTGGGAGCGGCTCGTCGAAGCAGGTCAGTGA Protein sequence : MGPTDRGRDSANVMSVRPIYLDYHATTPCDPRVVEVMLPYLTGDFGNPASGFHVYGRRAARAVEMAREQVAALIGAQASE IVFTSGATESNNLVLLGLTSSDQSRRRIVTTAVEHKSVLEPCRILHERGFEVVVLPVLPDGTVDLAAAEAAINEETLLVS VQTANNEIGSIQPIAVLAELAHRRGALLHTDAAQAVGKIPFNVEELGIDFASVSAHKLYGPKGIGALYVRSGLRRRLTPL LLGGGQEFNLRPGTLNVPAIVGFGEACRLAREEMPEEARRVAALRDLLESQLANRIPGLRFNGHRTRRLPGNSSITFPKI EADVLIANVPEVALSTGSACSSGTIEPSHVLTAIGLDWEEAHATIRIGIGRFTTREEIERAAHLIAIAWERLVEAGQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96060.1 | cysteine desulfurase | Not tested | T-PAI | Protein | 2e-60 | 50 |
