Gene Information

Name : rnhA (RSKD131_2240)
Accession : YP_002526601.1
Strain :
Genome accession: NC_011963
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : -
Position : 2270550 - 2271005 bp
Length : 456 bp
Strand : +
Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids

DNA sequence :
ATGCCAGACCTCTATGCCTATACCGACGGTGCCTGCAGCGGAAATCCCGGCCCGGGAGGCTGGGGCGTGCTGATGCTCGC
GCGCGAGGGCGAGGCGGTGGTCAAGGAGCGCACGCTGCAGGGCGGCGAGGTGCTCACCACCAACAACCGGATGGAGCTGA
TGGCCGCCATCTCGGCCCTCGAGGCGCTGACGCGGCCGACCGAGATCACCATCGTGACCGACAGCGCCTATGTGAAGAAC
GGCGTGACAACCTGGATCCACGGCTGGAAGCGCAACGGCTGGAAGACAGCCGACAAGAAGCCGGTGAAGAACGCGGAACT
CTGGGAAAGGCTCGACGCGGCCCAGCAGCGGCACAAGGTCGTCTGGCGCTGGATCAAGGGACATGCCGGCCACGCCGAGA
ACGAGCGTGCCGACGAGCTGGCACGCGCGGGCATGGCCCCCTTCAAGACGCGCTAG

Protein sequence :
MPDLYAYTDGACSGNPGPGGWGVLMLAREGEAVVKERTLQGGEVLTTNNRMELMAAISALEALTRPTEITIVTDSAYVKN
GVTTWIHGWKRNGWKTADKKPVKNAELWERLDAAQQRHKVVWRWIKGHAGHAENERADELARAGMAPFKTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 1e-35 58