|
Name : RSKD131_0944 (RSKD131_0944) Accession : YP_002525305.1 Strain : Genome accession: NC_011963 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 950440 - 952410 bp Length : 1971 bp Strand : + Note : - DNA sequence : ATGATTGTCGAACTCGGCCATTTCGCGCTGGTGCTGTCGCTGGCTGTGGCCCTTGTGCAGTCCGTGGTGCCGCTCGTCGG CGCGGATCGGCGCTGGTCGGGCTGGATGGCGGTGGCCGAACCCGCGGCGGTCACCCAGCTTCTGCTGATCGGCTTCTCCT TCGCCGCGCTGACCTGGGCCTTCGTGACCTCGGATTTCTCGGTGCGCCTCGTCGTGCTGAACTCGCACACGCTGAAGCCC ATGCTCTACAAGATCAGCGGCGTCTGGGGCAACCACGAGGGCTCGCTGCTTCTGTGGGTGCTGATCCTCGCGCTGTTCGG AGCCTGCGCCGCGGTCTTCGGGCAGAACCTGCCGCCCACGCTCAAGGCGCGCGTGCTGGCGGTGCAGGGGATGATCGGCG CGGCCTTCCTGGCCTTCCTCCTCTTCACCTCGAACCCGTTCCTGCGAATGGGCGAGGTGCCCTTCGACGGCGAGGATCTG AACCCGCTCCTGCAGGATCCGGGCCTCGCCTTCCACCCGCCCTTCCTCTACCTCGGCTATGTCGGCCTCTCGATGGCCTT CTCCTTCGCGGTGGCGGCCCTGATCGAGGGCCGCGTCGATGCCGCCTGGGGCCGCTGGGTCCGGCCCTGGACGCTCGCCG CCTGGGTGTTTCTCACCATCGGCATCGCGCTCGGGTCCTGGTGGGCCTATTACGAGCTCGGCTGGGGCGGCTTCTGGTTC TGGGACCCGGTCGAGAATGCCTCCTTCATGCCCTGGCTGATCGCGGCGGCGCTGCTCCATTCGGCCATCGTGGTCGAGAA GCGCGAAGCGCTGAAGAGCTGGACGATCCTGCTGGCCATCCTCGCCTTCGGCTTCTCGCTCATTGGCACCTTCATCGTGC GCTCGGGCGTCATCACCTCCGTCCATGCCTTCGCCAACGATCCCGAGCGCGGGATCTTCATCCTGATGATCCTCGCGATC TTCATGGGCGGGGCGCTCACGCTCTTCGCCGCGCGGGCGAGCGCCATGGAGGCCAAGGGGGTCTTCGGCATCGTCAGCCG CGAGTCGGGCCTCGTGCTGAACAACGTGCTGCTGACGGTGGCCTGTTTCGTGGTCTTTATCGGCACGATCTGGCCGCTCC TGGCCGAACTCCTCTGGGGCCGCAAGCTGTCGGTGGGCGCGCCCTTCTTCAATGCAGCCTTCACCCCCTTCATGGTGGTG ATCGCCCTCGTCCTGCCGCTGGGCGCCGTCCTGCCCTGGAAGCGGGCCGAGCTCGGCCGCGGGATGCGGCCGCTCTGGGG GGCGCTCGCGCTCTCGGCGGCCCTCGGTGCGCTGGTCTTCGCGCTGCAGACGGGCCGGTCGGCGCTCGGGCCCGTCGGCC TCGCGCTCGGCGCCTGGCTCCTCTTCGGCACGCTCCTCGACCTCTGGGGCCGCACCGGGCGCGGCGCGCTCGGCGGGCGG CTCGCGCGCCTCCAGCGGCTGCCGCGCGCGGACTGGGGCAAGGCCACCGCCCATGCGGGCCTCGGCGTCACGATCTTCGC CGTGGCGGCCATCACCGCCTGGCAGGTCGAGTCGATCCGCGTGATGAAGCCGGGCGAGACCTTCGCCCTCGGCCGCTACG ACGTCCTGCTCGAGGGCGTGCGCGAGATCGAGGGGCCGAACTACCGCTCGACCGTGGCCGACTTCCGCGTGACCCGCGAC GGGGCCGAAGTGGCGACGCTCCATCCCGAGAAGCGCGTCTATCCGGTGGCCGCCATGCCCACGACCGAAGCCGCCATCGA CTACGGCTTCACCCGCGACCTCTACCTCGTGATCGGCGACCCGCAGGAGGGCGGCGGCTATGCGGTGCGCAGCTACATCA AGCCCTTCGCCAACTGGATCTGGGGCGGCGCGCTGCTGATGGCGCTCGGCGGGCTGCTGAGCCTCTCGGACCGCCGCTAC CGCATCGCCGCAGGGGCGCGCCGGATGCCGGCCGCGGTGGCTGCAGAATGA Protein sequence : MIVELGHFALVLSLAVALVQSVVPLVGADRRWSGWMAVAEPAAVTQLLLIGFSFAALTWAFVTSDFSVRLVVLNSHTLKP MLYKISGVWGNHEGSLLLWVLILALFGACAAVFGQNLPPTLKARVLAVQGMIGAAFLAFLLFTSNPFLRMGEVPFDGEDL NPLLQDPGLAFHPPFLYLGYVGLSMAFSFAVAALIEGRVDAAWGRWVRPWTLAAWVFLTIGIALGSWWAYYELGWGGFWF WDPVENASFMPWLIAAALLHSAIVVEKREALKSWTILLAILAFGFSLIGTFIVRSGVITSVHAFANDPERGIFILMILAI FMGGALTLFAARASAMEAKGVFGIVSRESGLVLNNVLLTVACFVVFIGTIWPLLAELLWGRKLSVGAPFFNAAFTPFMVV IALVLPLGAVLPWKRAELGRGMRPLWGALALSAALGALVFALQTGRSALGPVGLALGAWLLFGTLLDLWGRTGRGALGGR LARLQRLPRADWGKATAHAGLGVTIFAVAAITAWQVESIRVMKPGETFALGRYDVLLEGVREIEGPNYRSTVADFRVTRD GAEVATLHPEKRVYPVAAMPTTEAAIDYGFTRDLYLVIGDPQEGGGYAVRSYIKPFANWIWGGALLMALGGLLSLSDRRY RIAAGARRMPAAVAAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 4e-106 | 50 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 1e-114 | 49 |
