Gene Information

Name : Geob_1980 (Geob_1980)
Accession : YP_002537438.1
Strain : Geobacter daltonii FRC-32
Genome accession: NC_011979
Putative virulence/resistance : Unknown
Product : cysteine desulfurase NifS
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1104
EC number : -
Position : 2220589 - 2221725 bp
Length : 1137 bp
Strand : -
Note : TIGRFAM: cysteine desulfurase NifS; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: gur:Gura_1493 aminotransferase, class V

DNA sequence :
ATGATTTACATGGATTACAATGCCACAGCTCCGGTCCATCCGGAAGTTCTTGAGGCGATCCTCCCCTTTTACCGGGAGCA
GTTCGGCAATCCTTCCAGCATCCATTGGGCAGGCAGGATGGTCAAGGGTGCGGTGGAGAAAGCCCGTGAAGAGGTGGCCG
GGCTGGTGGGCTGCGCACCGTCCGAGATGATTTTCACCTCCTGCGGCTCCGAGTCGGACAACATGGCAATCAAAGGTGTC
GCCGCCGCCAATCGCAGCAAGGGCAACCATATCATAACCACATCAGTTGAACATCCAGCCGTGCTCAACAGCTGCCACTA
TCTGGAACATGAGGGATACCGGATTACCAGGCTGCCGGTCGATAGAGATGGCCTCGTGGACCCGCAGGAGCTGAAGTCGG
CTATCGGCGACCAAACCATTCTTGTATCGGCCATGTTTGCCAACAATGAAACCGGCGTCCTTTTCCCTGTTCGGGAAATT
GGGGCCATCTGCAGGGAACGCGGAGTTTATTTCCACTGCGATGCCGTGCAGGCGGTGGGCAAGGTACCGGTTGACTGCCG
TGGCATGGACATTGGCCTGTTATCCCTCTCCGGCCATAAGATTGGCGCCCCCAAAGGTATCGGTGCACTGGTGGTCAGAA
AGGGGATCAAACTGCATCCCCTGCTCCACGGCGGCGCCCAGGAGCGTAACCGGCGAGCCGGCACGGAGAATGTCGCAGGG
ATTGTCGCTCTGGGCAAAGCATGCCAGATCGCCAGGGAGGAGATGTCTTCCGAGGCTGCAAGAGTGCAGCAGTTGCGTGA
CCGACTGGAAGAGGGTATCATGGCCATCTTTCCACAGGCAAGTCTGAACGGCCATCGTGAAAACCGCCTGCCGACCACTG
CCAACATATCTTTCACAGGACTTGAGGCAGACTCACTGCTCTTGAACCTGGATCTGCAAGGCATCGCCGTCTCGTCCGGT
TCCGCCTGCAGCTCAGGAACCCTCAAGGCATCACCGGTCCTCGCTGCCATGGGGGTCGATCCTGCTTCGGCCAAAGGTTC
CGTTCGTTTCTCACTGGGCAGGACAAATACCGAAGAAGAGGTAAATTACTTACTGGGGGTCCTGCCGGAGATCCTGCAGC
GGCTTCAGCAAAAATAG

Protein sequence :
MIYMDYNATAPVHPEVLEAILPFYREQFGNPSSIHWAGRMVKGAVEKAREEVAGLVGCAPSEMIFTSCGSESDNMAIKGV
AAANRSKGNHIITTSVEHPAVLNSCHYLEHEGYRITRLPVDRDGLVDPQELKSAIGDQTILVSAMFANNETGVLFPVREI
GAICRERGVYFHCDAVQAVGKVPVDCRGMDIGLLSLSGHKIGAPKGIGALVVRKGIKLHPLLHGGAQERNRRAGTENVAG
IVALGKACQIAREEMSSEAARVQQLRDRLEEGIMAIFPQASLNGHRENRLPTTANISFTGLEADSLLLNLDLQGIAVSSG
SACSSGTLKASPVLAAMGVDPASAKGSVRFSLGRTNTEEEVNYLLGVLPEILQRLQQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96060.1 cysteine desulfurase Not tested T-PAI Protein 2e-57 44