Gene Information

Name : Geob_2556 (Geob_2556)
Accession : YP_002538008.1
Strain : Geobacter daltonii FRC-32
Genome accession: NC_011979
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2805417 - 2806091 bp
Length : 675 bp
Strand : +
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gur:Gura_0083 ABC transporter

DNA sequence : 
ATGAAACTCATCGAAATACAAAACGTAAAGAAACACTACACTAGCGGAGAAGACGTTGTCGAAGCCTTGCGCGGTGTTGA
TATCAGCATAGAAGCCGGTGAATTTATCACCATAATGGGGCAGTCAGGCTCCGGTAAGAGCACCTTGCTCTCAGTTCTGG
GAGGAATGAACCATCCGACTTCCGGAGATGTCGAGATGGCCGGCGTACGTCTTTATGACCTGCCAGGGGAAAAGCTGGCC
GACTTCCGGGCACAAAACCTTGGGTTTGTTTTCCAATCATTTCACCTGATCCCGTACCTGACCGCTGCAGAGAATGTCAT
GCTGCCGTTAGCAATTGTCAAAATGGCTACCAGTGCAAAGAGGGCCGCGGCCCGCCAAGCCCTTGAAAGAGTCGGTCTGG
GGAACAAGCTTGGCCGGCTCCCCAACCAATTATCTGGGGGTGAGCAGGAACGTGTTGCCATTGCCAGGGCTATTGTCAAC
AACCCGCATATACTTTTGGCTGATGAGCCGACCGGCAACCTGGATTCCAAGACCAGCGAAGAGGTCATGGCATTATTCAG
GGAGTTGAATAATGCCGGACAGACAGTCGTGATGGTAACGCATAATGCTGAAAACGGGGCATACTCTGACAGAACCATAA
GCTTAAGGGACGGCATGGTTGTTGGTTCTGTTTGA

Protein sequence : 
MKLIEIQNVKKHYTSGEDVVEALRGVDISIEAGEFITIMGQSGSGKSTLLSVLGGMNHPTSGDVEMAGVRLYDLPGEKLA
DFRAQNLGFVFQSFHLIPYLTAAENVMLPLAIVKMATSAKRAAARQALERVGLGNKLGRLPNQLSGGEQERVAIARAIVN
NPHILLADEPTGNLDSKTSEEVMALFRELNNAGQTVVMVTHNAENGAYSDRTISLRDGMVVGSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-30 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-35 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-37 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-37 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-37 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Geob_2556 YP_002538008.1 ABC transporter CP001581.1.gene598.p Protein 1e-42 46
Geob_2556 YP_002538008.1 ABC transporter NC_008702.1.4606598. Protein 7e-38 46
Geob_2556 YP_002538008.1 ABC transporter NC_012469.1.7686878. Protein 3e-43 44
Geob_2556 YP_002538008.1 ABC transporter NC_012469.1.7685735. Protein 9e-38 42
Geob_2556 YP_002538008.1 ABC transporter CP001581.1.gene798.p Protein 5e-39 41