Gene Information

Name : Geob_3049 (Geob_3049)
Accession : YP_002538493.1
Strain : Geobacter daltonii FRC-32
Genome accession: NC_011979
Putative virulence/resistance : Unknown
Product : cysteine desulfurase NifS
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1104
EC number : -
Position : 3333777 - 3334949 bp
Length : 1173 bp
Strand : -
Note : TIGRFAM: cysteine desulfurase NifS; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: gur:Gura_1833 aminotransferase, class V

DNA sequence : 
ATGAAGGAAATTTATCTCGACAACAATGCCACAACAAAGGTGGATGAGGCTGTCTTTGAAGAGATGCGCCCCTATTTTTG
CGAGCTGTATGGCAACCCTAGTTCCATGCATTTTTTCGGTGGCCAGGTGCAGAAGAAGGTTGACGAGGCCCGGAACCGGG
TTGCCGCTCTTTTGGGGGCACTCCCCGAAGAGATTATCTTTACCGCCTGCGGCACGGAGAGCGATAATGCCGCCATTCGG
TCAGCCCTTGAGGTTTTTCCCGAGAAGCGGCATATCATCACCACCCGTGTGGAGCACCCCGCTGTCCTGACCCTGTGCCG
CAACCTGACCAAAAAGGGATACCGGGTCACCGAGCTGAACGTGGACAATGCCGGCCGGCTTGATCTCAACGAACTCAGGT
CTGCCCTTGACGATAACACCGCCATCGTTTCGGTGATGTATGCAAATAACGAGACTGGGGTCATCTTTCCTGTGGAAGAA
GTTGCGGCCATTGCCAAGGAAAAAGGGGCGCTCTTCCATACCGATGCGGTCCAGGCAGTGGGAAAAATTCCCCTCAACAT
GGCTGCTTCTTCCATCGACATGCTTTCCCTGTCGGGGCACAAGTTGCATGCACCCAAGGGAATCGGCGTCCTTTACGTGC
GCAAGGGCGTTCCTTTCAGGCCATTCATGGTCGGGGGACACCAGGAGAAAGGACGCAGGGCGGGTACGGAAAGCACCTCA
TCCATAATAGCCCTTGGCAAGGCCTGCGAGTTGGCCACAAAATTCATGGAAGATGAGAATACAAGAGTGAAAGGGATGCG
TGACCGGCTTGAAAGAGAGCTAATGGCCCTTATCCCCAGTGCCCGTGTTAACGGAGGGGCTGCCGACCGCCTTCCCAACA
CGACTTCCATCGCCTTTGAGTTTGTAGAAGGAGAGGCTATTCTGCTGCTGTTGAGCGAAAATGGCATCTGTGCTTCATCC
GGCAGTGCCTGTACTTCAGGCTCACTGGAGCCATCCCATGTGCTTCGTGCCATGGGGGTGCCATTTACCTGTGCCCACGG
CTCGATCAGGTTCTCCCTGTCTCGCTTTACCACCGATGGGGATATCGATGCCGTTATTCGCGAACTGCCCCCGGTCGTCA
ACCGTCTGCGTGAAATGTCTCCTTTCGGCAGAGAATTTCTGCAGTCAAAATAG

Protein sequence : 
MKEIYLDNNATTKVDEAVFEEMRPYFCELYGNPSSMHFFGGQVQKKVDEARNRVAALLGALPEEIIFTACGTESDNAAIR
SALEVFPEKRHIITTRVEHPAVLTLCRNLTKKGYRVTELNVDNAGRLDLNELRSALDDNTAIVSVMYANNETGVIFPVEE
VAAIAKEKGALFHTDAVQAVGKIPLNMAASSIDMLSLSGHKLHAPKGIGVLYVRKGVPFRPFMVGGHQEKGRRAGTESTS
SIIALGKACELATKFMEDENTRVKGMRDRLERELMALIPSARVNGGAADRLPNTTSIAFEFVEGEAILLLLSENGICASS
GSACTSGSLEPSHVLRAMGVPFTCAHGSIRFSLSRFTTDGDIDAVIRELPPVVNRLREMSPFGREFLQSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96060.1 cysteine desulfurase Not tested T-PAI Protein 2e-55 41